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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170412007
CEUK01002369
178510
Alphaproteobacteria
ACG
Arg
>WENV170412069
CEUK01007587
197241
Alphaproteobacteria
GGG
Pro
>WENV170412089
CEUK01009224
201940
Alphaproteobacteria
CAT
Met
>WENV170412143
CEUK01012370
197241
Alphaproteobacteria
GGG
Pro
>WENV170412176
CEUK01014165
308123
Alphaproteobacteria
CCA
Trp
>WENV170412228
CEUK01016303
400384
Alphaproteobacteria
TTC
Glu
>WENV170412684
CEUK01048424
201940
Alphaproteobacteria
CAT
Met
>WENV170412744
CEUK01052301
193088
Alphaproteobacteria
GAT
Ile
>WENV170412746
CEUK01052548
201940
Alphaproteobacteria
CAT
Met
>WENV170413049
CEUK01074269
140963
Alphaproteobacteria
>WENV170413081
CEUK01077198
197241
Alphaproteobacteria
GGG
Pro
>WENV170413213
CEUK01089758
75222
Alphaproteobacteria
GAG
Leu
>WENV170413272
CEUK01094781
281650
Alphaproteobacteria
CCA
Trp
>WENV170413489
CEUK01112801
419842
Alphaproteobacteria
GCC
Gly
>WENV170413509
CEUK01114290
118213
Alphaproteobacteria
TAG
Leu
>WENV170413661
CEUK01131175
212319
Alphaproteobacteria
GTG
His
>WENV170413704
CEUK01135307
180027
Alphaproteobacteria
CAT
Met
>WENV170413786
CEUK01144759
210530
Alphaproteobacteria
CGG
Pro
>WENV170413828
CEUK01149276
33571
Alphaproteobacteria
TGA
Ser
>WENV170413995
CEUK01166242
314617
Alphaproteobacteria
TAC
Val
>WENV170414051
CEUK01169722
140963
Alphaproteobacteria
>WENV170414169
CEUK01178117
489502
Alphaproteobacteria
GCA
Cys
>WENV170414217
CEUK01181033
197241
Alphaproteobacteria
GGG
Pro
>WENV170414758
CEUK01339225
289744
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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