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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170413603
CEUK01125062
73123
Gammaproteobacteria
CAA
Leu
>WENV170412044
CEUK01005620
20664
Gammaproteobacteria
GCT
Ser
>WENV170414647
CEUK01301322
73502
Gammaproteobacteria
CAG
Leu
>WENV170414380
CEUK01186490
179284
Gammaproteobacteria
CAT
Met
>WENV170414489
CEUK01234250
184446
Gammaproteobacteria
GAC
Val
>WENV170414488
CEUK01234250
208313
Gammaproteobacteria
GAC
Val
>WENV170412621
CEUK01044117
314350
Gammaproteobacteria
CCA
Trp
>WENV170414709
CEUK01327274
178469
Gammaproteobacteria
CAT
Met
>WENV170412735
CEUK01051499
180053
Gammaproteobacteria
CAT
Met
>WENV170412207
CEUK01015357
178175
Gammaproteobacteria
ACG
Arg
>WENV170414166
CEUK01177865
20618
Gammaproteobacteria
GGA
Ser
>WENV170412010
CEUK01002526
284022
Gammaproteobacteria
TGT
Thr
>WENV170412632
CEUK01044586
284022
Gammaproteobacteria
TGT
Thr
>WENV170412871
CEUK01063002
120827
Gammaproteobacteria
GAG
Leu
>WENV170412796
CEUK01056705
292194
Gammaproteobacteria
GGT
Thr
>WENV170413308
CEUK01097511
176520
Gammaproteobacteria
CAT
Met
>WENV170413196
CEUK01088284
283282
Gammaproteobacteria
TTT
Lys
>WENV170412690
CEUK01049035
281282
Gammaproteobacteria
TTC
Glu
>WENV170413096
CEUK01078934
280882
Gammaproteobacteria
GTG
His
>WENV170414526
CEUK01255637
176663
Gammaproteobacteria
GGG
Pro
>WENV170413852
CEUK01152294
118219
Gammaproteobacteria
TAG
Leu
>WENV170413746
CEUK01139462
30597
Gammaproteobacteria
TGA
Ser
>WENV170413498
CEUK01113422
299227
Gammaproteobacteria
GTT
Asn
>WENV170412981
CEUK01069540
292006
Gammaproteobacteria
TGC
Ala
>WENV170412041
CEUK01005531
480516
Gammaproteobacteria
GCA
Cys
>WENV170412033
CEUK01004762
480516
Gammaproteobacteria
GCA
Cys
>WENV170412885
CEUK01063727
126555
Gammaproteobacteria
GTA
Tyr
>WENV170413053
CEUK01074454
184459
Gammaproteobacteria
CAT
Met
>WENV170413541
CEUK01117599
178466
Gammaproteobacteria
CCA
Trp
>WENV170412583
CEUK01040328
197498
Gammaproteobacteria
TGG
Pro
>WENV170413488
CEUK01112791
178543
Gammaproteobacteria
GGG
Pro
>WENV170412585
CEUK01040328
291402
Gammaproteobacteria
GTG
His
>WENV170412159
CEUK01013091
280812
Gammaproteobacteria
GAA
Phe
>WENV170413980
CEUK01165091
292174
Gammaproteobacteria
GAA
Phe
>WENV170413986
CEUK01165575
176545
Gammaproteobacteria
CAT
Met
>WENV170414646
CEUK01301322
400402
Gammaproteobacteria
TTG
Gln
>WENV170412396
CEUK01028065
316303
Gammaproteobacteria
TTT
Lys
>WENV170413352
CEUK01101222
481678
Gammaproteobacteria
GCA
Cys
>WENV170412040
CEUK01005531
306288
Gammaproteobacteria
GCC
Gly
>WENV170412059
CEUK01006734
117821
Gammaproteobacteria
GTA
Tyr
>WENV170413658
CEUK01130743
176664
Gammaproteobacteria
CCT
Arg
>WENV170413351
CEUK01101222
319139
Gammaproteobacteria
GCC
Gly
>WENV170413395
CEUK01104481
488965
Gammaproteobacteria
GCA
Cys
>WENV170413588
CEUK01123560
180680
Gammaproteobacteria
GAC
Val
>WENV170413119
CEUK01080609
180680
Gammaproteobacteria
GAC
Val
>WENV170412980
CEUK01069540
176301
Gammaproteobacteria
GAT
Ile
>WENV170413150
CEUK01083183
176665
Gammaproteobacteria
CGG
Pro
>WENV170412277
CEUK01019967
285547
Gammaproteobacteria
TTG
Gln
>WENV170414138
CEUK01175746
315775
Gammaproteobacteria
TGT
Thr
>WENV170413246
CEUK01091875
281283
Gammaproteobacteria
GTG
His
>WENV170413135
CEUK01081974
281283
Gammaproteobacteria
GTG
His
>WENV170412903
CEUK01064671
176478
Gammaproteobacteria
CAT
Met
>WENV170412161
CEUK01013149
186591
Gammaproteobacteria
ACG
Arg
>WENV170412884
CEUK01063727
282902
Gammaproteobacteria
TGT
Thr
>WENV170412661
CEUK01047094
282902
Gammaproteobacteria
TGT
Thr
>WENV170412669
CEUK01047443
20968
Gammaproteobacteria
TGA
Ser
>WENV170413453
CEUK01109697
180679
Gammaproteobacteria
CCA
Trp
>WENV170413439
CEUK01108994
180679
Gammaproteobacteria
CCA
Trp
>WENV170413161
CEUK01084022
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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