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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170415169
CEUL01021088
400818
Bacteroidota
TTC
Glu
>WENV170416920
CEUL01148727
281538
Bacteroidota
GAA
Phe
>WENV170415061
CEUL01014417
222068
Bacteroidota
GAT
Ile
>WENV170417353
CEUL01305490
156605
Bacteroidota
GAC
Val
>WENV170416892
CEUL01148269
240785
Bacteroidota
GTC
Asp
>WENV170417237
CEUL01263424
305664
Bacteroidota
CAT
Met
>WENV170415088
CEUL01015431
336507
Bacteroidota
TCC
Gly
>WENV170415589
CEUL01051958
155808
Bacteroidota
TGG
Pro
>WENV170415528
CEUL01047484
155808
Bacteroidota
TGG
Pro
>WENV170415121
CEUL01017789
155808
Bacteroidota
TGG
Pro
>WENV170415395
CEUL01038570
121312
Bacteroidota
TAG
Leu
>WENV170415451
CEUL01042118
299065
Bacteroidota
TTG
Gln
>WENV170416501
CEUL01131310
299065
Bacteroidota
TTG
Gln
>WENV170416834
CEUL01146972
347386
Bacteroidota
CCA
Trp
>WENV170415304
CEUL01030774
347386
Bacteroidota
CCA
Trp
>WENV170414900
CEUL01004115
182234
Bacteroidota
TGT
Thr
>WENV170415201
CEUL01023194
24958
Bacteroidota
GGA
Ser
>WENV170415835
CEUL01072583
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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