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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170420449
CEUN01002570
176301
Gammaproteobacteria
GAT
Ile
>WENV170420450
CEUN01002570
292006
Gammaproteobacteria
TGC
Ala
>WENV170420463
CEUN01003410
178169
Gammaproteobacteria
GAC
Val
>WENV170420482
CEUN01004511
306288
Gammaproteobacteria
GCC
Gly
>WENV170420483
CEUN01004511
480516
Gammaproteobacteria
GCA
Cys
>WENV170420489
CEUN01005165
282902
Gammaproteobacteria
TGT
Thr
>WENV170420490
CEUN01005165
140925
Gammaproteobacteria
GTA
Tyr
>WENV170420573
CEUN01009735
186591
Gammaproteobacteria
ACG
Arg
>WENV170420643
CEUN01014310
20618
Gammaproteobacteria
GGA
Ser
>WENV170420660
CEUN01014754
186591
Gammaproteobacteria
ACG
Arg
>WENV170420661
CEUN01014754
186591
Gammaproteobacteria
ACG
Arg
>WENV170420681
CEUN01015763
180680
Gammaproteobacteria
GAC
Val
>WENV170420686
CEUN01016409
180680
Gammaproteobacteria
GAC
Val
>WENV170420715
CEUN01018723
120827
Gammaproteobacteria
GAG
Leu
>WENV170420791
CEUN01024537
329164
Gammaproteobacteria
TTT
Lys
>WENV170420800
CEUN01025144
176301
Gammaproteobacteria
GAT
Ile
>WENV170420886
CEUN01031032
180679
Gammaproteobacteria
CCA
Trp
>WENV170420922
CEUN01033681
20618
Gammaproteobacteria
GGA
Ser
>WENV170420935
CEUN01034851
306872
Gammaproteobacteria
GGC
Ala
>WENV170420947
CEUN01035281
314350
Gammaproteobacteria
CCA
Trp
>WENV170420977
CEUN01038559
23169
Gammaproteobacteria
GGA
Ser
>WENV170420996
CEUN01039800
292194
Gammaproteobacteria
GGT
Thr
>WENV170421127
CEUN01050364
314350
Gammaproteobacteria
CCA
Trp
>WENV170421159
CEUN01053207
20552
Gammaproteobacteria
GCT
Ser
>WENV170421164
CEUN01053460
180679
Gammaproteobacteria
CCA
Trp
>WENV170421183
CEUN01054951
317792
Gammaproteobacteria
TGC
Ala
>WENV170421218
CEUN01057294
177028
Gammaproteobacteria
CAT
Met
>WENV170421241
CEUN01058892
292194
Gammaproteobacteria
GGT
Thr
>WENV170421414
CEUN01073347
299855
Gammaproteobacteria
TAC
Val
>WENV170421470
CEUN01076922
488965
Gammaproteobacteria
GCA
Cys
>WENV170421480
CEUN01077590
281283
Gammaproteobacteria
GTG
His
>WENV170421518
CEUN01080807
176301
Gammaproteobacteria
GAT
Ile
>WENV170421564
CEUN01084807
176478
Gammaproteobacteria
CAT
Met
>WENV170421663
CEUN01091434
221659
Gammaproteobacteria
CAT
Met
>WENV170421759
CEUN01099591
218791
Gammaproteobacteria
ACG
Arg
>WENV170421856
CEUN01108986
284706
Gammaproteobacteria
GTT
Asn
>WENV170421989
CEUN01121562
292006
Gammaproteobacteria
TGC
Ala
>WENV170422049
CEUN01127615
218635
Gammaproteobacteria
GAC
Val
>WENV170422080
CEUN01130747
281283
Gammaproteobacteria
GTG
His
>WENV170422100
CEUN01133537
176545
Gammaproteobacteria
CAT
Met
>WENV170422128
CEUN01135173
284706
Gammaproteobacteria
GTT
Asn
>WENV170422165
CEUN01139172
304066
Gammaproteobacteria
TTT
Lys
>WENV170422229
CEUN01144323
56694
Gammaproteobacteria
GGA
Ser
>WENV170422245
CEUN01145349
280696
Gammaproteobacteria
TGT
Thr
>WENV170422381
CEUN01156038
176065
Gammaproteobacteria
CCT
Arg
>WENV170422419
CEUN01159427
193336
Gammaproteobacteria
GAC
Val
>WENV170422479
CEUN01163267
178168
Gammaproteobacteria
ACG
Arg
>WENV170422526
CEUN01166796
73123
Gammaproteobacteria
CAA
Leu
>WENV170422585
CEUN01170480
488965
Gammaproteobacteria
GCA
Cys
>WENV170422599
CEUN01171580
73044
Gammaproteobacteria
CAG
Leu
>WENV170422610
CEUN01172053
209464
Gammaproteobacteria
CCG
Arg
>WENV170422620
CEUN01173020
176063
Gammaproteobacteria
GGG
Pro
>WENV170422709
CEUN01177605
176064
Gammaproteobacteria
CAT
Met
>WENV170422711
CEUN01177687
315775
Gammaproteobacteria
TGT
Thr
>WENV170422737
CEUN01178547
176665
Gammaproteobacteria
CGG
Pro
>WENV170422826
CEUN01182072
180680
Gammaproteobacteria
GAC
Val
>WENV170423081
CEUN01296884
401684
Gammaproteobacteria
CCT
Arg
>WENV170423327
CEUN01386451
400354
Gammaproteobacteria
TTG
Gln
>WENV170423345
CEUN01393967
29392
Gammaproteobacteria
GCT
Ser
>WENV170423398
CEUN01408316
282413
Gammaproteobacteria
GTT
Asn
>WENV170423514
CEUN01429159
176061
Gammaproteobacteria
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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