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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170423658
CEUO01008874
481678
Gammaproteobacteria
GCA
Cys
>WENV170423679
CEUO01010957
401684
Gammaproteobacteria
CCT
Arg
>WENV170423763
CEUO01020798
176241
Gammaproteobacteria
CGG
Pro
>WENV170423853
CEUO01034904
281282
Gammaproteobacteria
TTC
Glu
>WENV170423860
CEUO01036615
74115
Gammaproteobacteria
CAG
Leu
>WENV170423864
CEUO01036794
180679
Gammaproteobacteria
CCA
Trp
>WENV170423887
CEUO01039309
180679
Gammaproteobacteria
CCA
Trp
>WENV170423891
CEUO01039697
117821
Gammaproteobacteria
GTA
Tyr
>WENV170423938
CEUO01046150
20618
Gammaproteobacteria
GGA
Ser
>WENV170423974
CEUO01052394
73063
Gammaproteobacteria
TAA
Leu
>WENV170424023
CEUO01057539
299227
Gammaproteobacteria
GTT
Asn
>WENV170424058
CEUO01060440
239021
Gammaproteobacteria
TCT
Arg
>WENV170424099
CEUO01064928
285547
Gammaproteobacteria
TTG
Gln
>WENV170424120
CEUO01068906
118413
Gammaproteobacteria
TAG
Leu
>WENV170424123
CEUO01069454
280882
Gammaproteobacteria
GTG
His
>WENV170424137
CEUO01071127
176243
Gammaproteobacteria
CCG
Arg
>WENV170424418
CEUO01136240
284132
Gammaproteobacteria
TTT
Lys
>WENV170424440
CEUO01148591
176665
Gammaproteobacteria
CGG
Pro
>WENV170424559
CEUO01197975
29419
Gammaproteobacteria
GGA
Ser
>WENV170424574
CEUO01201111
56108
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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