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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170424922
CEUP01023169
435083
Alphaproteobacteria
>WENV170424782
CEUP01010333
145377
Alphaproteobacteria
>WENV170425378
CEUP01090560
73523
Alphaproteobacteria
CAG
Leu
>WENV170425059
CEUP01038079
201940
Alphaproteobacteria
CAT
Met
>WENV170424861
CEUP01018471
282981
Alphaproteobacteria
CCA
Trp
>WENV170425028
CEUP01033555
29701
Alphaproteobacteria
CGA
Ser
>WENV170424780
CEUP01010270
282748
Alphaproteobacteria
CGT
Thr
>WENV170424719
CEUP01005891
234327
Alphaproteobacteria
GAT
Ile
>WENV170424779
CEUP01010270
480900
Alphaproteobacteria
GCA
Cys
>WENV170425339
CEUP01081970
427571
Alphaproteobacteria
GCC
Gly
>WENV170425042
CEUP01035230
13340
Alphaproteobacteria
GCT
Ser
>WENV170424827
CEUP01015909
400387
Alphaproteobacteria
GGT
Thr
>WENV170424908
CEUP01021120
281676
Alphaproteobacteria
TAC
Val
>WENV170424907
CEUP01021120
281676
Alphaproteobacteria
TAC
Val
>WENV170424807
CEUP01013673
121250
Alphaproteobacteria
TAG
Leu
>WENV170424896
CEUP01020425
481268
Alphaproteobacteria
TCC
Gly
>WENV170424916
CEUP01022283
179386
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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