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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170425160
CEUP01046730
73044
Gammaproteobacteria
CAG
Leu
>WENV170425329
CEUP01077523
73123
Gammaproteobacteria
CAA
Leu
>WENV170424876
CEUP01019531
117799
Gammaproteobacteria
GTA
Tyr
>WENV170425269
CEUP01051757
176064
Gammaproteobacteria
CAT
Met
>WENV170424997
CEUP01030992
25129
Gammaproteobacteria
TGA
Ser
>WENV170425401
CEUP01094857
29419
Gammaproteobacteria
GGA
Ser
>WENV170424912
CEUP01021858
183804
Gammaproteobacteria
CAT
Met
>WENV170424911
CEUP01021688
183804
Gammaproteobacteria
CAT
Met
>WENV170425072
CEUP01039394
29392
Gammaproteobacteria
GCT
Ser
>WENV170425277
CEUP01054468
184446
Gammaproteobacteria
GAC
Val
>WENV170425437
CEUP01101524
29803
Gammaproteobacteria
GGA
Ser
>WENV170424788
CEUP01011288
176061
Gammaproteobacteria
TCG
Arg
>WENV170424733
CEUP01007368
20618
Gammaproteobacteria
GGA
Ser
>WENV170424707
CEUP01004963
29834
Gammaproteobacteria
GCT
Ser
>WENV170425032
CEUP01033991
304066
Gammaproteobacteria
TTT
Lys
>WENV170424952
CEUP01025241
480653
Gammaproteobacteria
GCA
Cys
>WENV170424725
CEUP01005973
329164
Gammaproteobacteria
TTT
Lys
>WENV170424724
CEUP01005973
329164
Gammaproteobacteria
TTT
Lys
>WENV170425070
CEUP01039383
281172
Gammaproteobacteria
CAT
Met
>WENV170424728
CEUP01006691
176663
Gammaproteobacteria
GGG
Pro
>WENV170424636
CEUP01001096
176214
Gammaproteobacteria
ACG
Arg
>WENV170424851
CEUP01017543
176208
Gammaproteobacteria
TCT
Arg
>WENV170425479
CEUP01104911
282413
Gammaproteobacteria
GTT
Asn
>WENV170424638
CEUP01001178
480516
Gammaproteobacteria
GCA
Cys
>WENV170425040
CEUP01035184
184459
Gammaproteobacteria
CAT
Met
>WENV170425270
CEUP01051861
56694
Gammaproteobacteria
GGA
Ser
>WENV170425248
CEUP01050262
117798
Gammaproteobacteria
CAA
Leu
>WENV170425046
CEUP01035905
20400
Gammaproteobacteria
TGA
Ser
>WENV170424995
CEUP01030597
176545
Gammaproteobacteria
CAT
Met
>WENV170424816
CEUP01014850
176175
Gammaproteobacteria
CCT
Arg
>WENV170424825
CEUP01015446
282947
Gammaproteobacteria
GTT
Asn
>WENV170424811
CEUP01014033
312181
Gammaproteobacteria
TTT
Lys
>WENV170424810
CEUP01014033
312181
Gammaproteobacteria
TTT
Lys
>WENV170424787
CEUP01011288
301064
Gammaproteobacteria
TTT
Lys
>WENV170424645
CEUP01001895
401684
Gammaproteobacteria
CCT
Arg
>WENV170425071
CEUP01039392
176065
Gammaproteobacteria
CCT
Arg
>WENV170425098
CEUP01043045
74048
Gammaproteobacteria
CAA
Leu
>WENV170424637
CEUP01001178
306288
Gammaproteobacteria
GCC
Gly
>WENV170424850
CEUP01017505
117821
Gammaproteobacteria
GTA
Tyr
>WENV170425078
CEUP01039840
280699
Gammaproteobacteria
GGT
Thr
>WENV170425038
CEUP01034894
346373
Gammaproteobacteria
GAA
Phe
>WENV170425407
CEUP01096894
20401
Gammaproteobacteria
GGA
Ser
>WENV170425089
CEUP01041556
239021
Gammaproteobacteria
TCT
Arg
>WENV170424962
CEUP01025598
370389
Gammaproteobacteria
GGC
Ala
>WENV170424910
CEUP01021397
180680
Gammaproteobacteria
GAC
Val
>WENV170424708
CEUP01004993
180680
Gammaproteobacteria
GAC
Val
>WENV170424956
CEUP01025364
176665
Gammaproteobacteria
CGG
Pro
>WENV170425422
CEUP01100306
400354
Gammaproteobacteria
TTG
Gln
>WENV170424781
CEUP01010322
118371
Gammaproteobacteria
CAA
Leu
>WENV170425075
CEUP01039840
280696
Gammaproteobacteria
TGT
Thr
>WENV170425081
CEUP01040081
315775
Gammaproteobacteria
TGT
Thr
>WENV170425171
CEUP01048212
315775
Gammaproteobacteria
TGT
Thr
>WENV170425334
CEUP01081114
281283
Gammaproteobacteria
GTG
His
>WENV170424690
CEUP01003563
186591
Gammaproteobacteria
ACG
Arg
>WENV170424689
CEUP01003563
186591
Gammaproteobacteria
ACG
Arg
>WENV170424688
CEUP01003563
186591
Gammaproteobacteria
ACG
Arg
>WENV170424666
CEUP01002530
186591
Gammaproteobacteria
ACG
Arg
>WENV170424859
CEUP01018114
178221
Gammaproteobacteria
CCT
Arg
>WENV170424921
CEUP01022980
20968
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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