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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170427645
CEUQ01185378
193373
Alphaproteobacteria
CGG
Pro
>WENV170427724
CEUQ01187825
176225
Alphaproteobacteria
TGG
Pro
>WENV170428315
CEUQ01409660
193463
Alphaproteobacteria
CCT
Arg
>WENV170426379
CEUQ01078483
282589
Alphaproteobacteria
GGC
Ala
>WENV170427293
CEUQ01163886
140963
Alphaproteobacteria
>WENV170427683
CEUQ01186802
287529
Alphaproteobacteria
TAC
Val
>WENV170425708
CEUQ01017345
481268
Alphaproteobacteria
TCC
Gly
>WENV170426723
CEUQ01110136
193088
Alphaproteobacteria
GAT
Ile
>WENV170426654
CEUQ01102230
192131
Alphaproteobacteria
GTC
Asp
>WENV170426345
CEUQ01075032
176153
Alphaproteobacteria
CAT
Met
>WENV170426526
CEUQ01091706
176153
Alphaproteobacteria
CAT
Met
>WENV170427835
CEUQ01189833
118066
Alphaproteobacteria
TAG
Leu
>WENV170428128
CEUQ01345837
118066
Alphaproteobacteria
TAG
Leu
>WENV170426821
CEUQ01118887
296763
Alphaproteobacteria
CCA
Trp
>WENV170426548
CEUQ01093947
296763
Alphaproteobacteria
CCA
Trp
>WENV170427240
CEUQ01160216
289744
Alphaproteobacteria
CGT
Thr
>WENV170425518
CEUQ01002368
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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