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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170425650
CEUQ01012663
284706
Gammaproteobacteria
GTT
Asn
>WENV170426708
CEUQ01108067
284706
Gammaproteobacteria
GTT
Asn
>WENV170426860
CEUQ01122620
158246
Gammaproteobacteria
GTC
Asp
>WENV170426749
CEUQ01112816
480941
Gammaproteobacteria
TCC
Gly
>WENV170427103
CEUQ01146450
299414
Gammaproteobacteria
TTT
Lys
>WENV170428364
CEUQ01428159
176554
Gammaproteobacteria
CAT
Met
>WENV170427192
CEUQ01154616
193336
Gammaproteobacteria
GAC
Val
>WENV170428254
CEUQ01392928
180053
Gammaproteobacteria
CAT
Met
>WENV170427188
CEUQ01154453
292194
Gammaproteobacteria
GGT
Thr
>WENV170426750
CEUQ01112816
292194
Gammaproteobacteria
GGT
Thr
>WENV170427497
CEUQ01177659
283506
Gammaproteobacteria
TTT
Lys
>WENV170428290
CEUQ01402991
176069
Gammaproteobacteria
TCT
Arg
>WENV170426239
CEUQ01064127
13452
Gammaproteobacteria
GCT
Ser
>WENV170427959
CEUQ01259564
292006
Gammaproteobacteria
TGC
Ala
>WENV170426546
CEUQ01093917
292006
Gammaproteobacteria
TGC
Ala
>WENV170425653
CEUQ01012886
117774
Gammaproteobacteria
GAG
Leu
>WENV170425687
CEUQ01015630
177028
Gammaproteobacteria
CAT
Met
>WENV170426958
CEUQ01132417
180680
Gammaproteobacteria
GAC
Val
>WENV170426545
CEUQ01093917
176301
Gammaproteobacteria
GAT
Ile
>WENV170426600
CEUQ01097917
285547
Gammaproteobacteria
TTG
Gln
>WENV170428044
CEUQ01303490
282018
Gammaproteobacteria
TGT
Thr
>WENV170427150
CEUQ01150693
296680
Gammaproteobacteria
GTT
Asn
>WENV170428291
CEUQ01402991
286691
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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