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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170433509
CEUS01182902
193373
Alphaproteobacteria
CGG
Pro
>WENV170432257
CEUS01078842
334086
Alphaproteobacteria
GGC
Ala
>WENV170434426
CEUS01259521
334086
Alphaproteobacteria
GGC
Ala
>WENV170434017
CEUS01227993
210530
Alphaproteobacteria
CGG
Pro
>WENV170433107
CEUS01145709
400518
Alphaproteobacteria
GAA
Phe
>WENV170433668
CEUS01198689
193088
Alphaproteobacteria
GAT
Ile
>WENV170434030
CEUS01228757
487436
Alphaproteobacteria
TCC
Gly
>WENV170433392
CEUS01172085
305403
Alphaproteobacteria
>WENV170435510
CEUS01483110
224292
Alphaproteobacteria
CGG
Pro
>WENV170432355
CEUS01084223
176153
Alphaproteobacteria
CAT
Met
>WENV170434550
CEUS01267565
419842
Alphaproteobacteria
GCC
Gly
>WENV170433917
CEUS01220368
419842
Alphaproteobacteria
GCC
Gly
>WENV170433882
CEUS01217912
334158
Alphaproteobacteria
CTT
Lys
>WENV170435195
CEUS01348622
282981
Alphaproteobacteria
CCA
Trp
>WENV170434283
CEUS01250188
400106
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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