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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170436270
CEUT01036562
29419
Gammaproteobacteria
GGA
Ser
>WENV170436189
CEUT01027876
184467
Gammaproteobacteria
TCT
Arg
>WENV170436196
CEUT01028074
399050
Gammaproteobacteria
CCT
Arg
>WENV170436058
CEUT01017196
20618
Gammaproteobacteria
GGA
Ser
>WENV170436368
CEUT01045977
197233
Gammaproteobacteria
CAT
Met
>WENV170436355
CEUT01044467
284022
Gammaproteobacteria
TGT
Thr
>WENV170436759
CEUT01121210
284131
Gammaproteobacteria
GCC
Gly
>WENV170436190
CEUT01027876
280882
Gammaproteobacteria
GTG
His
>WENV170436789
CEUT01126374
30550
Gammaproteobacteria
GGA
Ser
>WENV170435898
CEUT01004413
13452
Gammaproteobacteria
GCT
Ser
>WENV170436274
CEUT01037519
178540
Gammaproteobacteria
TGG
Pro
>WENV170435997
CEUT01012774
56108
Gammaproteobacteria
TGA
Ser
>WENV170436094
CEUT01022253
286623
Gammaproteobacteria
GTT
Asn
>WENV170436095
CEUT01022253
286623
Gammaproteobacteria
GTT
Asn
>WENV170436193
CEUT01027899
176244
Gammaproteobacteria
TGG
Pro
>WENV170436394
CEUT01048396
481325
Gammaproteobacteria
TCC
Gly
>WENV170436499
CEUT01060257
176241
Gammaproteobacteria
CGG
Pro
>WENV170436261
CEUT01035015
183701
Gammaproteobacteria
GAT
Ile
>WENV170436000
CEUT01012774
73063
Gammaproteobacteria
TAA
Leu
>WENV170436313
CEUT01040399
181520
Gammaproteobacteria
ACG
Arg
>WENV170436315
CEUT01040704
282922
Gammaproteobacteria
GAA
Phe
>WENV170435868
CEUT01001323
481678
Gammaproteobacteria
GCA
Cys
>WENV170436201
CEUT01029106
117821
Gammaproteobacteria
GTA
Tyr
>WENV170436265
CEUT01035811
205778
Gammaproteobacteria
GTC
Asp
>WENV170436640
CEUT01078529
180680
Gammaproteobacteria
GAC
Val
>WENV170436218
CEUT01030434
400184
Gammaproteobacteria
>WENV170436312
CEUT01040399
8667
Gammaproteobacteria
GCT
Ser
>WENV170435929
CEUT01006406
186591
Gammaproteobacteria
ACG
Arg
>WENV170435928
CEUT01006406
186591
Gammaproteobacteria
ACG
Arg
>WENV170435897
CEUT01004300
186591
Gammaproteobacteria
ACG
Arg
>WENV170436358
CEUT01044467
285826
Gammaproteobacteria
GGT
Thr
>WENV170436316
CEUT01040704
400928
Gammaproteobacteria
>WENV170436289
CEUT01038612
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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