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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170444688
CEUX01203286
284706
Gammaproteobacteria
GTT
Asn
>WENV170443821
CEUX01019021
184230
Gammaproteobacteria
TCT
Arg
>WENV170443947
CEUX01034245
29419
Gammaproteobacteria
GGA
Ser
>WENV170444076
CEUX01050908
183804
Gammaproteobacteria
CAT
Met
>WENV170443722
CEUX01006328
480941
Gammaproteobacteria
TCC
Gly
>WENV170443703
CEUX01003070
179283
Gammaproteobacteria
ACG
Arg
>WENV170443704
CEUX01003070
179283
Gammaproteobacteria
ACG
Arg
>WENV170444015
CEUX01043803
184467
Gammaproteobacteria
TCT
Arg
>WENV170444199
CEUX01069911
178469
Gammaproteobacteria
CAT
Met
>WENV170444519
CEUX01129768
180053
Gammaproteobacteria
CAT
Met
>WENV170443953
CEUX01034914
178544
Gammaproteobacteria
CAT
Met
>WENV170444443
CEUX01102719
399050
Gammaproteobacteria
CCT
Arg
>WENV170443924
CEUX01031546
401696
Gammaproteobacteria
TTG
Gln
>WENV170444366
CEUX01097514
284131
Gammaproteobacteria
GCC
Gly
>WENV170443800
CEUX01015400
140925
Gammaproteobacteria
GTA
Tyr
>WENV170444016
CEUX01043803
280882
Gammaproteobacteria
GTG
His
>WENV170444460
CEUX01103487
30550
Gammaproteobacteria
GGA
Ser
>WENV170444121
CEUX01057400
74240
Gammaproteobacteria
CAA
Leu
>WENV170443954
CEUX01034914
118219
Gammaproteobacteria
TAG
Leu
>WENV170444729
CEUX01211474
184451
Gammaproteobacteria
CAT
Met
>WENV170443748
CEUX01008317
20487
Gammaproteobacteria
TGA
Ser
>WENV170444385
CEUX01099630
20487
Gammaproteobacteria
TGA
Ser
>WENV170443994
CEUX01041285
184459
Gammaproteobacteria
CAT
Met
>WENV170443820
CEUX01019021
178473
Gammaproteobacteria
TGG
Pro
>WENV170444627
CEUX01181925
56108
Gammaproteobacteria
TGA
Ser
>WENV170443801
CEUX01015400
481325
Gammaproteobacteria
TCC
Gly
>WENV170444362
CEUX01096813
176241
Gammaproteobacteria
CGG
Pro
>WENV170444195
CEUX01069207
118413
Gammaproteobacteria
TAG
Leu
>WENV170444163
CEUX01065234
481678
Gammaproteobacteria
GCA
Cys
>WENV170444164
CEUX01065234
73504
Gammaproteobacteria
TAA
Leu
>WENV170444411
CEUX01101572
180680
Gammaproteobacteria
GAC
Val
>WENV170444186
CEUX01068494
285547
Gammaproteobacteria
TTG
Gln
>WENV170444168
CEUX01065679
118371
Gammaproteobacteria
CAA
Leu
>WENV170443749
CEUX01008317
8635
Gammaproteobacteria
GCT
Ser
>WENV170443723
CEUX01006328
296808
Gammaproteobacteria
GGT
Thr
>WENV170444124
CEUX01057699
119044
Gammaproteobacteria
GTA
Tyr
>WENV170443718
CEUX01006080
186591
Gammaproteobacteria
ACG
Arg
>WENV170443799
CEUX01015400
282902
Gammaproteobacteria
TGT
Thr
>WENV170443699
CEUX01002249
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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