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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170447307
CEUY01203890
281538
Bacteroidota
GAA
Phe
>WENV170444974
CEUY01013934
222068
Bacteroidota
GAT
Ile
>WENV170447384
CEUY01205906
23370
Bacteroidota
GGA
Ser
>WENV170445532
CEUY01046017
240785
Bacteroidota
GTC
Asp
>WENV170445487
CEUY01042552
21789
Bacteroidota
GGA
Ser
>WENV170447354
CEUY01205197
121312
Bacteroidota
TAG
Leu
>WENV170444794
CEUY01002845
121312
Bacteroidota
TAG
Leu
>WENV170446018
CEUY01086726
413853
Bacteroidota
GGT
Thr
>WENV170447197
CEUY01198353
372845
Bacteroidota
CCA
Trp
>WENV170445436
CEUY01040577
372845
Bacteroidota
CCA
Trp
>WENV170445326
CEUY01033703
372845
Bacteroidota
CCA
Trp
>WENV170445273
CEUY01030472
372845
Bacteroidota
CCA
Trp
>WENV170447777
CEUY01392512
401036
Bacteroidota
CCT
Arg
>WENV170446026
CEUY01087408
182234
Bacteroidota
TGT
Thr
>WENV170446646
CEUY01151821
179598
Bacteroidota
CAT
Met
>WENV170445955
CEUY01082006
299085
Bacteroidota
TTT
Lys
>WENV170446958
CEUY01182837
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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