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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170458168
CEVB01041858
176044
Gammaproteobacteria
GAC
Val
>WENV170458352
CEVB01070080
29419
Gammaproteobacteria
GGA
Ser
>WENV170458176
CEVB01043724
189904
Gammaproteobacteria
CCA
Trp
>WENV170458726
CEVB01158032
399050
Gammaproteobacteria
CCT
Arg
>WENV170458528
CEVB01087036
176243
Gammaproteobacteria
CCG
Arg
>WENV170458100
CEVB01032310
284131
Gammaproteobacteria
GCC
Gly
>WENV170457939
CEVB01011119
280882
Gammaproteobacteria
GTG
His
>WENV170457888
CEVB01005249
13452
Gammaproteobacteria
GCT
Ser
>WENV170458263
CEVB01059553
184451
Gammaproteobacteria
CAT
Met
>WENV170458224
CEVB01051035
299227
Gammaproteobacteria
GTT
Asn
>WENV170457903
CEVB01006545
56108
Gammaproteobacteria
TGA
Ser
>WENV170457883
CEVB01004982
176244
Gammaproteobacteria
TGG
Pro
>WENV170457839
CEVB01000233
176241
Gammaproteobacteria
CGG
Pro
>WENV170458389
CEVB01074022
401684
Gammaproteobacteria
CCT
Arg
>WENV170457906
CEVB01006545
73063
Gammaproteobacteria
TAA
Leu
>WENV170457889
CEVB01005249
232119
Gammaproteobacteria
ACG
Arg
>WENV170458351
CEVB01069679
117821
Gammaproteobacteria
GTA
Tyr
>WENV170458137
CEVB01036439
239021
Gammaproteobacteria
TCT
Arg
>WENV170458486
CEVB01081436
239021
Gammaproteobacteria
TCT
Arg
>WENV170458113
CEVB01033609
180680
Gammaproteobacteria
GAC
Val
>WENV170458032
CEVB01023073
285547
Gammaproteobacteria
TTG
Gln
>WENV170458214
CEVB01050143
481314
Gammaproteobacteria
GCA
Cys
>WENV170457955
CEVB01012832
208907
Gammaproteobacteria
ACG
Arg
>WENV170457956
CEVB01012832
208907
Gammaproteobacteria
ACG
Arg
>WENV170458140
CEVB01036598
186591
Gammaproteobacteria
ACG
Arg
>WENV170458141
CEVB01036598
186591
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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