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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170459230
CEVC01037308
178510
Alphaproteobacteria
ACG
Arg
>WENV170461221
CEVC01327761
296698
Alphaproteobacteria
CGC
Ala
>WENV170460327
CEVC01140062
176225
Alphaproteobacteria
TGG
Pro
>WENV170459869
CEVC01091493
29841
Alphaproteobacteria
GGA
Ser
>WENV170459696
CEVC01076996
140963
Alphaproteobacteria
>WENV170460346
CEVC01142312
193088
Alphaproteobacteria
GAT
Ile
>WENV170461070
CEVC01266836
73986
Alphaproteobacteria
CAG
Leu
>WENV170460112
CEVC01115074
400045
Alphaproteobacteria
GCC
Gly
>WENV170460615
CEVC01165123
400045
Alphaproteobacteria
GCC
Gly
>WENV170460619
CEVC01165284
400045
Alphaproteobacteria
GCC
Gly
>WENV170459893
CEVC01093666
400029
Alphaproteobacteria
GGT
Thr
>WENV170459897
CEVC01094228
400029
Alphaproteobacteria
GGT
Thr
>WENV170459359
CEVC01048351
398994
Alphaproteobacteria
GTT
Asn
>WENV170460863
CEVC01172371
180027
Alphaproteobacteria
CAT
Met
>WENV170461264
CEVC01340839
289744
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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