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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170462746
CEVD01084058
210530
Alphaproteobacteria
CGG
Pro
>WENV170464836
CEVD01257434
178731
Alphaproteobacteria
GTC
Asp
>WENV170464815
CEVD01239099
181950
Alphaproteobacteria
TCT
Arg
>WENV170465324
CEVD01484537
121250
Alphaproteobacteria
TAG
Leu
>WENV170465035
CEVD01369655
192131
Alphaproteobacteria
GTC
Asp
>WENV170463746
CEVD01171256
176153
Alphaproteobacteria
CAT
Met
>WENV170465291
CEVD01475712
73986
Alphaproteobacteria
CAG
Leu
>WENV170463310
CEVD01129713
192275
Alphaproteobacteria
GTG
His
>WENV170463430
CEVD01143358
481098
Alphaproteobacteria
CTG
Gln
>WENV170464892
CEVD01287937
481098
Alphaproteobacteria
CTG
Gln
>WENV170464895
CEVD01289527
118066
Alphaproteobacteria
TAG
Leu
>WENV170465112
CEVD01400377
282981
Alphaproteobacteria
CCA
Trp
>WENV170465132
CEVD01407318
481099
Alphaproteobacteria
TCC
Gly
>WENV170462766
CEVD01085471
428327
Alphaproteobacteria
GCC
Gly
>WENV170465108
CEVD01397774
195438
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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