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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170461491
CEVD01005886
306288
Gammaproteobacteria
GCC
Gly
>WENV170461631
CEVD01013020
13452
Gammaproteobacteria
GCT
Ser
>WENV170461632
CEVD01013020
232119
Gammaproteobacteria
ACG
Arg
>WENV170461633
CEVD01013020
232119
Gammaproteobacteria
ACG
Arg
>WENV170461839
CEVD01024121
20618
Gammaproteobacteria
GGA
Ser
>WENV170461855
CEVD01025310
92638
Gammaproteobacteria
TAA
Leu
>WENV170461854
CEVD01025310
481678
Gammaproteobacteria
GCA
Cys
>WENV170461961
CEVD01032697
183804
Gammaproteobacteria
CAT
Met
>WENV170461962
CEVD01032702
197498
Gammaproteobacteria
TGG
Pro
>WENV170462227
CEVD01047757
284706
Gammaproteobacteria
GTT
Asn
>WENV170462281
CEVD01050748
20552
Gammaproteobacteria
GCT
Ser
>WENV170462384
CEVD01059472
176301
Gammaproteobacteria
GAT
Ile
>WENV170462411
CEVD01062005
292194
Gammaproteobacteria
GGT
Thr
>WENV170462413
CEVD01062022
401684
Gammaproteobacteria
CCT
Arg
>WENV170462536
CEVD01069307
176301
Gammaproteobacteria
GAT
Ile
>WENV170462607
CEVD01073958
285547
Gammaproteobacteria
TTG
Gln
>WENV170462757
CEVD01084778
180678
Gammaproteobacteria
CCG
Arg
>WENV170463101
CEVD01113331
304066
Gammaproteobacteria
TTT
Lys
>WENV170463102
CEVD01113331
304066
Gammaproteobacteria
TTT
Lys
>WENV170463137
CEVD01115925
342077
Gammaproteobacteria
TAC
Val
>WENV170463228
CEVD01123265
480653
Gammaproteobacteria
GCA
Cys
>WENV170463407
CEVD01140760
74048
Gammaproteobacteria
CAA
Leu
>WENV170463630
CEVD01162253
287558
Gammaproteobacteria
TTC
Glu
>WENV170463663
CEVD01165197
306288
Gammaproteobacteria
GCC
Gly
>WENV170463824
CEVD01176021
180679
Gammaproteobacteria
CCA
Trp
>WENV170464150
CEVD01197918
329164
Gammaproteobacteria
TTT
Lys
>WENV170464248
CEVD01203791
56694
Gammaproteobacteria
GGA
Ser
>WENV170464770
CEVD01221482
180680
Gammaproteobacteria
GAC
Val
>WENV170465296
CEVD01476523
184459
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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