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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170471521
CEVG01079369
284706
Gammaproteobacteria
GTT
Asn
>WENV170470760
CEVG01008634
158246
Gammaproteobacteria
GTC
Asp
>WENV170471635
CEVG01089944
297858
Gammaproteobacteria
TGC
Ala
>WENV170472606
CEVG01234398
480941
Gammaproteobacteria
TCC
Gly
>WENV170471697
CEVG01097467
178539
Gammaproteobacteria
GAC
Val
>WENV170471767
CEVG01103954
118218
Gammaproteobacteria
TAG
Leu
>WENV170471175
CEVG01043767
314350
Gammaproteobacteria
CCA
Trp
>WENV170472004
CEVG01128959
20618
Gammaproteobacteria
GGA
Ser
>WENV170471984
CEVG01127746
284022
Gammaproteobacteria
TGT
Thr
>WENV170470791
CEVG01011535
287057
Gammaproteobacteria
GAA
Phe
>WENV170471123
CEVG01038427
178025
Gammaproteobacteria
GAC
Val
>WENV170471865
CEVG01115819
73501
Gammaproteobacteria
GAG
Leu
>WENV170471227
CEVG01048258
176868
Gammaproteobacteria
CAT
Met
>WENV170472463
CEVG01169545
480516
Gammaproteobacteria
GCA
Cys
>WENV170471738
CEVG01101186
178543
Gammaproteobacteria
GGG
Pro
>WENV170471627
CEVG01089433
56340
Gammaproteobacteria
GGA
Ser
>WENV170470725
CEVG01006176
290359
Gammaproteobacteria
TTT
Lys
>WENV170472839
CEVG01312876
74048
Gammaproteobacteria
CAA
Leu
>WENV170471637
CEVG01090135
196907
Gammaproteobacteria
GAC
Val
>WENV170471634
CEVG01089944
176301
Gammaproteobacteria
GAT
Ile
>WENV170471225
CEVG01048214
176301
Gammaproteobacteria
GAT
Ile
>WENV170471877
CEVG01116920
301005
Gammaproteobacteria
TGC
Ala
>WENV170472734
CEVG01283643
176665
Gammaproteobacteria
CGG
Pro
>WENV170471901
CEVG01119853
119044
Gammaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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