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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170482797
CEVM01060410
456078
Actinobacteria
TTG
Gln
>WENV170482945
CEVM01073079
456078
Actinobacteria
TTG
Gln
>WENV170483343
CEVM01112881
366609
Actinobacteria
TTT
Lys
>WENV170483037
CEVM01081287
57288
Actinobacteria
TGA
Ser
>WENV170483219
CEVM01101567
57288
Actinobacteria
TGA
Ser
>WENV170483457
CEVM01120830
30248
Actinobacteria
CGA
Ser
>WENV170483323
CEVM01111000
290385
Actinobacteria
CGT
Thr
>WENV170483020
CEVM01079781
286628
Actinobacteria
GTG
His
>WENV170483846
CEVM01202990
75551
Actinobacteria
CAG
Leu
>WENV170482150
CEVM01009882
219754
Actinobacteria
CAT
Met
>WENV170482586
CEVM01042685
469191
Actinobacteria
CTG
Gln
>WENV170484084
CEVM01257614
286927
Actinobacteria
TCT
Arg
>WENV170483025
CEVM01080674
301953
Actinobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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