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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170484080
CEVM01256963
360947
Alphaproteobacteria
TTT
Lys
>WENV170483962
CEVM01230006
207217
Alphaproteobacteria
CCG
Arg
>WENV170482171
CEVM01010817
353682
Alphaproteobacteria
CGC
Ala
>WENV170482678
CEVM01050922
29596
Alphaproteobacteria
GCT
Ser
>WENV170482075
CEVM01004327
20437
Alphaproteobacteria
GGA
Ser
>WENV170483523
CEVM01124404
20437
Alphaproteobacteria
GGA
Ser
>WENV170483503
CEVM01123771
201940
Alphaproteobacteria
CAT
Met
>WENV170482383
CEVM01025948
509917
Alphaproteobacteria
TCC
Gly
>WENV170483948
CEVM01225957
400516
Alphaproteobacteria
TTG
Gln
>WENV170483385
CEVM01115810
280784
Alphaproteobacteria
TGC
Ala
>WENV170482003
CEVM01000823
486348
Alphaproteobacteria
GCA
Cys
>WENV170482120
CEVM01007172
121250
Alphaproteobacteria
TAG
Leu
>WENV170483062
CEVM01084179
427571
Alphaproteobacteria
GCC
Gly
>WENV170484057
CEVM01252017
192131
Alphaproteobacteria
GTC
Asp
>WENV170482259
CEVM01016658
141247
Alphaproteobacteria
CAA
Leu
>WENV170482667
CEVM01049870
398999
Alphaproteobacteria
GGT
Thr
>WENV170483761
CEVM01173546
280860
Alphaproteobacteria
TAC
Val
>WENV170482252
CEVM01016259
400517
Alphaproteobacteria
GGT
Thr
>WENV170483189
CEVM01098964
280785
Alphaproteobacteria
CCA
Trp
>WENV170482285
CEVM01018921
481099
Alphaproteobacteria
TCC
Gly
>WENV170482824
CEVM01062061
428327
Alphaproteobacteria
GCC
Gly
>WENV170483955
CEVM01228126
338616
Alphaproteobacteria
TGC
Ala
>WENV170482099
CEVM01006287
332802
Alphaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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