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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170487561
CEVO01069482
446430
Alphaproteobacteria
CAC
Val
>WENV170487738
CEVO01087356
399001
Alphaproteobacteria
GAC
Val
>WENV170488400
CEVO01198986
207217
Alphaproteobacteria
CCG
Arg
>WENV170487700
CEVO01082894
29596
Alphaproteobacteria
GCT
Ser
>WENV170487043
CEVO01019726
193463
Alphaproteobacteria
CCT
Arg
>WENV170487498
CEVO01063643
375285
Alphaproteobacteria
TAC
Val
>WENV170487953
CEVO01109544
201940
Alphaproteobacteria
CAT
Met
>WENV170487820
CEVO01096093
201940
Alphaproteobacteria
CAT
Met
>WENV170486926
CEVO01008833
201940
Alphaproteobacteria
CAT
Met
>WENV170487832
CEVO01097336
400518
Alphaproteobacteria
GAA
Phe
>WENV170488049
CEVO01117203
288727
Alphaproteobacteria
>WENV170488264
CEVO01148767
177003
Alphaproteobacteria
CCT
Arg
>WENV170487414
CEVO01054076
193088
Alphaproteobacteria
GAT
Ile
>WENV170488175
CEVO01124631
400516
Alphaproteobacteria
TTG
Gln
>WENV170486885
CEVO01005425
400516
Alphaproteobacteria
TTG
Gln
>WENV170486858
CEVO01003970
280784
Alphaproteobacteria
TGC
Ala
>WENV170487962
CEVO01110104
75222
Alphaproteobacteria
GAG
Leu
>WENV170487706
CEVO01083439
399480
Alphaproteobacteria
GAA
Phe
>WENV170487370
CEVO01049715
486348
Alphaproteobacteria
GCA
Cys
>WENV170488104
CEVO01120453
400384
Alphaproteobacteria
TTC
Glu
>WENV170487968
CEVO01110947
238389
Alphaproteobacteria
CCT
Arg
>WENV170487639
CEVO01076873
301916
Alphaproteobacteria
TAC
Val
>WENV170488281
CEVO01155494
183632
Alphaproteobacteria
GGG
Pro
>WENV170487644
CEVO01077258
340918
Alphaproteobacteria
CGT
Thr
>WENV170488008
CEVO01114459
121250
Alphaproteobacteria
TAG
Leu
>WENV170487973
CEVO01111319
121250
Alphaproteobacteria
TAG
Leu
>WENV170486806
CEVO01000342
178733
Alphaproteobacteria
CAT
Met
>WENV170487148
CEVO01030115
427571
Alphaproteobacteria
GCC
Gly
>WENV170487383
CEVO01051059
427571
Alphaproteobacteria
GCC
Gly
>WENV170487683
CEVO01080429
192131
Alphaproteobacteria
GTC
Asp
>WENV170488120
CEVO01122008
141247
Alphaproteobacteria
CAA
Leu
>WENV170488164
CEVO01124231
398999
Alphaproteobacteria
GGT
Thr
>WENV170488625
CEVO01245603
435083
Alphaproteobacteria
>WENV170487807
CEVO01095291
178503
Alphaproteobacteria
GGG
Pro
>WENV170487212
CEVO01035200
231082
Alphaproteobacteria
ACG
Arg
>WENV170487853
CEVO01099677
29610
Alphaproteobacteria
TGA
Ser
>WENV170488166
CEVO01124258
192275
Alphaproteobacteria
GTG
His
>WENV170487617
CEVO01075235
400517
Alphaproteobacteria
GGT
Thr
>WENV170488420
CEVO01205012
156060
Alphaproteobacteria
GGG
Pro
>WENV170487971
CEVO01111114
481098
Alphaproteobacteria
CTG
Gln
>WENV170487616
CEVO01075153
481098
Alphaproteobacteria
CTG
Gln
>WENV170487469
CEVO01061257
481098
Alphaproteobacteria
CTG
Gln
>WENV170488082
CEVO01118769
190625
Alphaproteobacteria
ACG
Arg
>WENV170487961
CEVO01110019
190625
Alphaproteobacteria
ACG
Arg
>WENV170487353
CEVO01047834
325687
Alphaproteobacteria
CCA
Trp
>WENV170487671
CEVO01079945
282658
Alphaproteobacteria
CGT
Thr
>WENV170488579
CEVO01238047
212319
Alphaproteobacteria
GTG
His
>WENV170488605
CEVO01242154
488318
Alphaproteobacteria
TCC
Gly
>WENV170487949
CEVO01108986
178736
Alphaproteobacteria
CCT
Arg
>WENV170488028
CEVO01115653
398994
Alphaproteobacteria
GTT
Asn
>WENV170487697
CEVO01082397
398994
Alphaproteobacteria
GTT
Asn
>WENV170487448
CEVO01058001
398994
Alphaproteobacteria
GTT
Asn
>WENV170487277
CEVO01041564
29495
Alphaproteobacteria
GCT
Ser
>WENV170488060
CEVO01117804
345907
Alphaproteobacteria
CGT
Thr
>WENV170487258
CEVO01039924
282981
Alphaproteobacteria
CCA
Trp
>WENV170488515
CEVO01225014
400106
Alphaproteobacteria
GTT
Asn
>WENV170487141
CEVO01029318
296763
Alphaproteobacteria
CCA
Trp
>WENV170488138
CEVO01122926
121990
Alphaproteobacteria
TAG
Leu
>WENV170488122
CEVO01122076
481099
Alphaproteobacteria
TCC
Gly
>WENV170487400
CEVO01053011
481099
Alphaproteobacteria
TCC
Gly
>WENV170487292
CEVO01042986
481099
Alphaproteobacteria
TCC
Gly
>WENV170487874
CEVO01101573
428327
Alphaproteobacteria
GCC
Gly
>WENV170487882
CEVO01102029
480900
Alphaproteobacteria
GCA
Cys
>WENV170487410
CEVO01053776
400386
Alphaproteobacteria
TTG
Gln
>WENV170488383
CEVO01193682
29739
Alphaproteobacteria
CGA
Ser
>WENV170487415
CEVO01054076
338616
Alphaproteobacteria
TGC
Ala
>WENV170488302
CEVO01164553
305449
Alphaproteobacteria
CGT
Thr
>WENV170488623
CEVO01245426
332802
Alphaproteobacteria
GGC
Ala
>WENV170487638
CEVO01076796
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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