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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170487510
CEVO01064320
170858
Bacteroidota
TGG
Pro
>WENV170488155
CEVO01123890
281538
Bacteroidota
GAA
Phe
>WENV170487494
CEVO01063363
303411
Bacteroidota
>WENV170486979
CEVO01014400
364431
Bacteroidota
TCC
Gly
>WENV170487360
CEVO01048920
281190
Bacteroidota
CAT
Met
>WENV170488005
CEVO01114373
281190
Bacteroidota
CAT
Met
>WENV170487412
CEVO01054035
240785
Bacteroidota
GTC
Asp
>WENV170488614
CEVO01243724
336507
Bacteroidota
TCC
Gly
>WENV170486968
CEVO01012957
402171
Bacteroidota
TTC
Glu
>WENV170488204
CEVO01125182
291910
Bacteroidota
TTG
Gln
>WENV170488233
CEVO01134130
185890
Bacteroidota
TGC
Ala
>WENV170487496
CEVO01063423
299065
Bacteroidota
TTG
Gln
>WENV170486868
CEVO01004385
193718
Bacteroidota
GTC
Asp
>WENV170487488
CEVO01062544
117927
Bacteroidota
TAG
Leu
>WENV170488052
CEVO01117307
231584
Bacteroidota
TCT
Arg
>WENV170488100
CEVO01120288
284409
Bacteroidota
CAT
Met
>WENV170488140
CEVO01123220
206043
Bacteroidota
GTC
Asp
>WENV170488183
CEVO01125007
118418
Bacteroidota
TAG
Leu
>WENV170487256
CEVO01039576
233847
Bacteroidota
TGC
Ala
>WENV170488102
CEVO01120428
24958
Bacteroidota
GGA
Ser
>WENV170488558
CEVO01233220
195088
Bacteroidota
CAT
Met
>WENV170487006
CEVO01016276
179598
Bacteroidota
CAT
Met
>WENV170487174
CEVO01031794
299085
Bacteroidota
TTT
Lys
>WENV170488629
CEVO01246447
480568
Bacteroidota
GCA
Cys
>WENV170488017
CEVO01115157
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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