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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170491260
CEVQ01047315
193463
Alphaproteobacteria
CCT
Arg
>WENV170491285
CEVQ01048160
121250
Alphaproteobacteria
TAG
Leu
>WENV170491478
CEVQ01067353
280784
Alphaproteobacteria
TGC
Ala
>WENV170491593
CEVQ01076730
400516
Alphaproteobacteria
TTG
Gln
>WENV170491594
CEVQ01076867
178734
Alphaproteobacteria
TGG
Pro
>WENV170491720
CEVQ01087897
20437
Alphaproteobacteria
GGA
Ser
>WENV170491851
CEVQ01100574
481098
Alphaproteobacteria
CTG
Gln
>WENV170491959
CEVQ01108615
73523
Alphaproteobacteria
CAG
Leu
>WENV170492495
CEVQ01139694
400517
Alphaproteobacteria
GGT
Thr
>WENV170492723
CEVQ01194464
180029
Alphaproteobacteria
CAT
Met
>WENV170492748
CEVQ01198787
192131
Alphaproteobacteria
GTC
Asp
>WENV170492812
CEVQ01225441
480900
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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