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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170490599
CEVQ01007492
232119
Gammaproteobacteria
ACG
Arg
>WENV170491095
CEVQ01036041
186591
Gammaproteobacteria
ACG
Arg
>WENV170491094
CEVQ01036041
186591
Gammaproteobacteria
ACG
Arg
>WENV170491737
CEVQ01089969
73116
Gammaproteobacteria
CAA
Leu
>WENV170492303
CEVQ01132014
74048
Gammaproteobacteria
CAA
Leu
>WENV170490967
CEVQ01028787
183804
Gammaproteobacteria
CAT
Met
>WENV170492544
CEVQ01140769
180679
Gammaproteobacteria
CCA
Trp
>WENV170490765
CEVQ01017232
180679
Gammaproteobacteria
CCA
Trp
>WENV170493404
CEVQ01358629
180678
Gammaproteobacteria
CCG
Arg
>WENV170492332
CEVQ01133211
401684
Gammaproteobacteria
CCT
Arg
>WENV170492057
CEVQ01116508
176065
Gammaproteobacteria
CCT
Arg
>WENV170493397
CEVQ01358488
180680
Gammaproteobacteria
GAC
Val
>WENV170490435
CEVQ01000199
176301
Gammaproteobacteria
GAT
Ile
>WENV170492562
CEVQ01140910
481678
Gammaproteobacteria
GCA
Cys
>WENV170492024
CEVQ01113330
481314
Gammaproteobacteria
GCA
Cys
>WENV170491439
CEVQ01064112
306288
Gammaproteobacteria
GCC
Gly
>WENV170490706
CEVQ01014354
20552
Gammaproteobacteria
GCT
Ser
>WENV170492125
CEVQ01121486
29392
Gammaproteobacteria
GCT
Ser
>WENV170490598
CEVQ01007492
13452
Gammaproteobacteria
GCT
Ser
>WENV170492586
CEVQ01140954
20618
Gammaproteobacteria
GGA
Ser
>WENV170492585
CEVQ01140951
56694
Gammaproteobacteria
GGA
Ser
>WENV170490957
CEVQ01028195
370389
Gammaproteobacteria
GGC
Ala
>WENV170490451
CEVQ01000851
328691
Gammaproteobacteria
GGT
Thr
>WENV170492130
CEVQ01121694
284706
Gammaproteobacteria
GTT
Asn
>WENV170490492
CEVQ01002139
299227
Gammaproteobacteria
GTT
Asn
>WENV170492563
CEVQ01140910
92638
Gammaproteobacteria
TAA
Leu
>WENV170493077
CEVQ01316012
176061
Gammaproteobacteria
TCG
Arg
>WENV170491831
CEVQ01099533
180681
Gammaproteobacteria
TGG
Pro
>WENV170492309
CEVQ01132094
315775
Gammaproteobacteria
TGT
Thr
>WENV170491182
CEVQ01041761
329164
Gammaproteobacteria
TTT
Lys
>WENV170491941
CEVQ01106686
329164
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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