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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170496061
CEVS01020118
408543
Alphaproteobacteria
GAC
Val
>WENV170496221
CEVS01037601
400211
Alphaproteobacteria
>WENV170496363
CEVS01052013
481268
Alphaproteobacteria
TCC
Gly
>WENV170496471
CEVS01063045
140963
Alphaproteobacteria
>WENV170496654
CEVS01084209
75222
Alphaproteobacteria
GAG
Leu
>WENV170496677
CEVS01086673
400029
Alphaproteobacteria
GGT
Thr
>WENV170496948
CEVS01118259
400514
Alphaproteobacteria
TTG
Gln
>WENV170497035
CEVS01128613
299458
Alphaproteobacteria
TTT
Lys
>WENV170497157
CEVS01146346
29598
Alphaproteobacteria
GGA
Ser
>WENV170497253
CEVS01163354
118213
Alphaproteobacteria
TAG
Leu
>WENV170497510
CEVS01189995
399244
Alphaproteobacteria
GTT
Asn
>WENV170498027
CEVS01392506
410893
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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