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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170498222
CEVT01015896
178237
Alphaproteobacteria
CAT
Met
>WENV170498770
CEVT01070644
284764
Alphaproteobacteria
CAT
Met
>WENV170498786
CEVT01072311
193088
Alphaproteobacteria
GAT
Ile
>WENV170498813
CEVT01075129
84860
Alphaproteobacteria
CAG
Leu
>WENV170498833
CEVT01076864
181950
Alphaproteobacteria
TCT
Arg
>WENV170498879
CEVT01083113
400211
Alphaproteobacteria
>WENV170498911
CEVT01089271
140876
Alphaproteobacteria
>WENV170498969
CEVT01096171
400250
Alphaproteobacteria
GAC
Val
>WENV170499167
CEVT01122693
145377
Alphaproteobacteria
>WENV170499225
CEVT01130808
360947
Alphaproteobacteria
TTT
Lys
>WENV170499310
CEVT01143535
293691
Alphaproteobacteria
GAA
Phe
>WENV170499428
CEVT01158325
176234
Alphaproteobacteria
CCT
Arg
>WENV170499565
CEVT01174533
400544
Alphaproteobacteria
GGT
Thr
>WENV170499931
CEVT01273114
496447
Alphaproteobacteria
GCA
Cys
>WENV170500141
CEVT01367506
402222
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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