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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170498842
CEVT01077730
284706
Gammaproteobacteria
GTT
Asn
>WENV170498167
CEVT01011737
20664
Gammaproteobacteria
GCT
Ser
>WENV170498789
CEVT01072465
328691
Gammaproteobacteria
GGT
Thr
>WENV170498660
CEVT01058308
20618
Gammaproteobacteria
GGA
Ser
>WENV170499883
CEVT01244220
292006
Gammaproteobacteria
TGC
Ala
>WENV170498597
CEVT01051878
197498
Gammaproteobacteria
TGG
Pro
>WENV170498584
CEVT01050817
176545
Gammaproteobacteria
CAT
Met
>WENV170499210
CEVT01128943
481325
Gammaproteobacteria
TCC
Gly
>WENV170498169
CEVT01011737
232119
Gammaproteobacteria
ACG
Arg
>WENV170498168
CEVT01011737
232119
Gammaproteobacteria
ACG
Arg
>WENV170499208
CEVT01128638
74048
Gammaproteobacteria
CAA
Leu
>WENV170498549
CEVT01047155
180680
Gammaproteobacteria
GAC
Val
>WENV170498880
CEVT01083186
176301
Gammaproteobacteria
GAT
Ile
>WENV170498548
CEVT01047155
285547
Gammaproteobacteria
TTG
Gln
>WENV170498062
CEVT01000239
180681
Gammaproteobacteria
TGG
Pro
>WENV170499282
CEVT01138684
56109
Gammaproteobacteria
TAA
Leu
>WENV170498790
CEVT01072466
180679
Gammaproteobacteria
CCA
Trp
>WENV170498170
CEVT01011737
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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