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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170501156
CEVU01083162
284706
Gammaproteobacteria
GTT
Asn
>WENV170501500
CEVU01125644
297858
Gammaproteobacteria
TGC
Ala
>WENV170502071
CEVU01201284
176796
Gammaproteobacteria
GGG
Pro
>WENV170500807
CEVU01049009
480629
Gammaproteobacteria
GCA
Cys
>WENV170500325
CEVU01005875
291402
Gammaproteobacteria
GTG
His
>WENV170500394
CEVU01010562
281436
Gammaproteobacteria
TGC
Ala
>WENV170502450
CEVU01366841
178169
Gammaproteobacteria
GAC
Val
>WENV170500393
CEVU01010562
176794
Gammaproteobacteria
GAT
Ile
>WENV170500601
CEVU01028010
334421
Gammaproteobacteria
TGT
Thr
>WENV170500398
CEVU01011060
176301
Gammaproteobacteria
GAT
Ile
>WENV170500898
CEVU01057297
176301
Gammaproteobacteria
GAT
Ile
>WENV170501332
CEVU01106581
176301
Gammaproteobacteria
GAT
Ile
>WENV170501210
CEVU01089262
141076
Gammaproteobacteria
GTA
Tyr
>WENV170500854
CEVU01053718
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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