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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170502499
CEVV01000026
428327
Alphaproteobacteria
GCC
Gly
>WENV170502500
CEVV01000026
308123
Alphaproteobacteria
CCA
Trp
>WENV170502695
CEVV01016243
197241
Alphaproteobacteria
GGG
Pro
>WENV170502718
CEVV01018387
178503
Alphaproteobacteria
GGG
Pro
>WENV170502816
CEVV01025711
197241
Alphaproteobacteria
GGG
Pro
>WENV170502823
CEVV01026161
424450
Alphaproteobacteria
GGT
Thr
>WENV170502868
CEVV01030947
408543
Alphaproteobacteria
GAC
Val
>WENV170502981
CEVV01040886
179388
Alphaproteobacteria
GTG
His
>WENV170503092
CEVV01051786
178510
Alphaproteobacteria
ACG
Arg
>WENV170503328
CEVV01078334
428327
Alphaproteobacteria
GCC
Gly
>WENV170503617
CEVV01112442
360947
Alphaproteobacteria
TTT
Lys
>WENV170503683
CEVV01119788
281650
Alphaproteobacteria
CCA
Trp
>WENV170503966
CEVV01153339
75222
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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