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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170504977
CEVW01018057
299323
Cyanobacteriota
CAT
Met
>WENV170505388
CEVW01058874
100172
Cyanobacteriota
CAA
Leu
>WENV170504885
CEVW01010994
400473
Cyanobacteriota
GAC
Val
>WENV170504838
CEVW01008243
285848
Cyanobacteriota
CAT
Met
>WENV170505252
CEVW01043051
180925
Cyanobacteriota
ACG
Arg
>WENV170506103
CEVW01133388
292138
Cyanobacteriota
CCA
Trp
>WENV170506124
CEVW01134724
228486
Cyanobacteriota
GTC
Asp
>WENV170505499
CEVW01069830
228486
Cyanobacteriota
GTC
Asp
>WENV170504745
CEVW01000018
401929
Cyanobacteriota
TTG
Gln
>WENV170505986
CEVW01123603
291400
Cyanobacteriota
GTG
His
>WENV170504837
CEVW01008111
29723
Cyanobacteriota
TGA
Ser
>WENV170505377
CEVW01057473
410287
Cyanobacteriota
CCC
Gly
>WENV170504859
CEVW01009332
177220
Cyanobacteriota
CAT
Met
>WENV170506242
CEVW01140228
185579
Cyanobacteriota
CAT
Met
>WENV170504789
CEVW01003563
399503
Cyanobacteriota
GTT
Asn
>WENV170504903
CEVW01012758
176367
Cyanobacteriota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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