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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170507207
CEVX01025833
453054
Cyanobacteriota
GAC
Val
>WENV170507361
CEVX01041584
453054
Cyanobacteriota
GAC
Val
>WENV170507213
CEVX01026547
326453
Cyanobacteriota
CGC
Ala
>WENV170507161
CEVX01022587
30885
Cyanobacteriota
GGA
Ser
>WENV170507212
CEVX01026372
195553
Cyanobacteriota
GGG
Pro
>WENV170507304
CEVX01035012
282452
Cyanobacteriota
GGC
Ala
>WENV170508292
CEVX01149213
400473
Cyanobacteriota
GAC
Val
>WENV170507133
CEVX01020276
400473
Cyanobacteriota
GAC
Val
>WENV170508330
CEVX01153675
291400
Cyanobacteriota
GTG
His
>WENV170507555
CEVX01063299
16506
Cyanobacteriota
GCT
Ser
>WENV170507979
CEVX01114520
283431
Cyanobacteriota
GTG
His
>WENV170508308
CEVX01151199
410287
Cyanobacteriota
CCC
Gly
>WENV170508239
CEVX01143153
410287
Cyanobacteriota
CCC
Gly
>WENV170507766
CEVX01087412
400477
Cyanobacteriota
GTT
Asn
>WENV170507183
CEVX01024168
400477
Cyanobacteriota
GTT
Asn
>WENV170507580
CEVX01065777
178673
Cyanobacteriota
CCG
Arg
>WENV170506948
CEVX01005212
178673
Cyanobacteriota
CCG
Arg
>WENV170507401
CEVX01046738
185579
Cyanobacteriota
CAT
Met
>WENV170507693
CEVX01078313
185579
Cyanobacteriota
CAT
Met
>WENV170508166
CEVX01133414
176367
Cyanobacteriota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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