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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170512292
CEVZ01176774
282894
Gammaproteobacteria
GAA
Phe
>WENV170512248
CEVZ01172679
517041
Gammaproteobacteria
TCC
Gly
>WENV170512105
CEVZ01153495
292006
Gammaproteobacteria
TGC
Ala
>WENV170512472
CEVZ01199063
181513
Gammaproteobacteria
TGG
Pro
>WENV170510774
CEVZ01028172
242732
Gammaproteobacteria
ACG
Arg
>WENV170512894
CEVZ01242137
243308
Gammaproteobacteria
TGG
Pro
>WENV170513346
CEVZ01427752
56694
Gammaproteobacteria
GGA
Ser
>WENV170511271
CEVZ01067390
176545
Gammaproteobacteria
CAT
Met
>WENV170511895
CEVZ01128687
118413
Gammaproteobacteria
TAG
Leu
>WENV170512182
CEVZ01164051
401684
Gammaproteobacteria
CCT
Arg
>WENV170512718
CEVZ01225592
178169
Gammaproteobacteria
GAC
Val
>WENV170510718
CEVZ01023774
232119
Gammaproteobacteria
ACG
Arg
>WENV170512170
CEVZ01162092
74048
Gammaproteobacteria
CAA
Leu
>WENV170510498
CEVZ01006315
239021
Gammaproteobacteria
TCT
Arg
>WENV170512191
CEVZ01164563
370389
Gammaproteobacteria
GGC
Ala
>WENV170512960
CEVZ01246345
180680
Gammaproteobacteria
GAC
Val
>WENV170510578
CEVZ01011653
176301
Gammaproteobacteria
GAT
Ile
>WENV170511764
CEVZ01117447
180678
Gammaproteobacteria
CCG
Arg
>WENV170512986
CEVZ01261819
176478
Gammaproteobacteria
CAT
Met
>WENV170512454
CEVZ01196944
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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