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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170514682
CEWA01116969
178168
Gammaproteobacteria
ACG
Arg
>WENV170513474
CEWA01006125
232119
Gammaproteobacteria
ACG
Arg
>WENV170514150
CEWA01059310
183804
Gammaproteobacteria
CAT
Met
>WENV170514569
CEWA01095740
353123
Gammaproteobacteria
CCA
Trp
>WENV170513797
CEWA01031691
180679
Gammaproteobacteria
CCA
Trp
>WENV170513984
CEWA01044850
180678
Gammaproteobacteria
CCG
Arg
>WENV170514771
CEWA01151678
401684
Gammaproteobacteria
CCT
Arg
>WENV170513695
CEWA01023929
180680
Gammaproteobacteria
GAC
Val
>WENV170514157
CEWA01059605
176301
Gammaproteobacteria
GAT
Ile
>WENV170514355
CEWA01080069
481678
Gammaproteobacteria
GCA
Cys
>WENV170513437
CEWA01003431
20618
Gammaproteobacteria
GGA
Ser
>WENV170514619
CEWA01097666
349758
Gammaproteobacteria
GGC
Ala
>WENV170513717
CEWA01025379
328691
Gammaproteobacteria
GGT
Thr
>WENV170514549
CEWA01094801
158246
Gammaproteobacteria
GTC
Asp
>WENV170514720
CEWA01131840
480941
Gammaproteobacteria
TCC
Gly
>WENV170514134
CEWA01058229
292006
Gammaproteobacteria
TGC
Ala
>WENV170514572
CEWA01095965
283486
Gammaproteobacteria
TGT
Thr
>WENV170513723
CEWA01025816
285547
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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