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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170518055
CEWE01085039
158246
Gammaproteobacteria
GTC
Asp
>WENV170518409
CEWE01121748
297858
Gammaproteobacteria
TGC
Ala
>WENV170517234
CEWE01020753
178164
Gammaproteobacteria
GAT
Ile
>WENV170519784
CEWE01257900
179284
Gammaproteobacteria
CAT
Met
>WENV170520316
CEWE01456124
281276
Gammaproteobacteria
GGT
Thr
>WENV170519081
CEWE01202154
178025
Gammaproteobacteria
GAC
Val
>WENV170517707
CEWE01055232
13452
Gammaproteobacteria
GCT
Ser
>WENV170519511
CEWE01241401
351236
Gammaproteobacteria
TTT
Lys
>WENV170518270
CEWE01108710
292006
Gammaproteobacteria
TGC
Ala
>WENV170518774
CEWE01161272
242732
Gammaproteobacteria
ACG
Arg
>WENV170519096
CEWE01203567
197498
Gammaproteobacteria
TGG
Pro
>WENV170518218
CEWE01102320
292174
Gammaproteobacteria
GAA
Phe
>WENV170519085
CEWE01202392
299855
Gammaproteobacteria
TAC
Val
>WENV170520518
CEWE01517721
118413
Gammaproteobacteria
TAG
Leu
>WENV170517708
CEWE01055232
232119
Gammaproteobacteria
ACG
Arg
>WENV170517812
CEWE01063413
306288
Gammaproteobacteria
GCC
Gly
>WENV170519864
CEWE01261193
346373
Gammaproteobacteria
GAA
Phe
>WENV170519084
CEWE01202392
118414
Gammaproteobacteria
TAG
Leu
>WENV170518618
CEWE01145572
370389
Gammaproteobacteria
GGC
Ala
>WENV170518269
CEWE01108710
176301
Gammaproteobacteria
GAT
Ile
>WENV170516982
CEWE01001354
176301
Gammaproteobacteria
GAT
Ile
>WENV170519716
CEWE01254470
230011
Gammaproteobacteria
ACG
Arg
>WENV170519613
CEWE01248214
481314
Gammaproteobacteria
GCA
Cys
>WENV170517744
CEWE01058088
180681
Gammaproteobacteria
TGG
Pro
>WENV170519435
CEWE01236532
315775
Gammaproteobacteria
TGT
Thr
>WENV170517745
CEWE01058088
184424
Gammaproteobacteria
TCT
Arg
>WENV170518353
CEWE01117618
282902
Gammaproteobacteria
TGT
Thr
>WENV170517328
CEWE01027228
282902
Gammaproteobacteria
TGT
Thr
>WENV170518733
CEWE01157757
286691
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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