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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170530832
CEWK01063057
400211
Alphaproteobacteria
>WENV170530364
CEWK01015064
178510
Alphaproteobacteria
ACG
Arg
>WENV170530950
CEWK01077705
73490
Alphaproteobacteria
GAG
Leu
>WENV170531081
CEWK01091457
193088
Alphaproteobacteria
GAT
Ile
>WENV170531076
CEWK01091133
402795
Alphaproteobacteria
GCC
Gly
>WENV170530620
CEWK01037121
29495
Alphaproteobacteria
GCT
Ser
>WENV170530864
CEWK01067004
400544
Alphaproteobacteria
GGT
Thr
>WENV170531020
CEWK01085841
400544
Alphaproteobacteria
GGT
Thr
>WENV170531129
CEWK01098207
400517
Alphaproteobacteria
GGT
Thr
>WENV170530595
CEWK01034696
400029
Alphaproteobacteria
GGT
Thr
>WENV170530814
CEWK01061324
192236
Alphaproteobacteria
GTC
Asp
>WENV170531363
CEWK01125617
398994
Alphaproteobacteria
GTT
Asn
>WENV170530813
CEWK01061324
289671
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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