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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170536950
CEWP01335682
208947
Alphaproteobacteria
CAT
Met
>WENV170535790
CEWP01106139
282745
Alphaproteobacteria
TAC
Val
>WENV170536565
CEWP01223799
416697
Alphaproteobacteria
GAC
Val
>WENV170535464
CEWP01064431
140876
Alphaproteobacteria
>WENV170535386
CEWP01055332
400387
Alphaproteobacteria
GGT
Thr
>WENV170535775
CEWP01103767
201940
Alphaproteobacteria
CAT
Met
>WENV170535346
CEWP01048704
140893
Alphaproteobacteria
CAA
Leu
>WENV170535663
CEWP01089330
140893
Alphaproteobacteria
CAA
Leu
>WENV170535875
CEWP01117455
197241
Alphaproteobacteria
GGG
Pro
>WENV170535128
CEWP01028187
481268
Alphaproteobacteria
TCC
Gly
>WENV170535226
CEWP01036360
481268
Alphaproteobacteria
TCC
Gly
>WENV170535146
CEWP01029443
400384
Alphaproteobacteria
TTC
Glu
>WENV170534974
CEWP01013777
408543
Alphaproteobacteria
GAC
Val
>WENV170535944
CEWP01128820
435083
Alphaproteobacteria
>WENV170535313
CEWP01045135
435083
Alphaproteobacteria
>WENV170535258
CEWP01039060
212319
Alphaproteobacteria
GTG
His
>WENV170535398
CEWP01056811
398994
Alphaproteobacteria
GTT
Asn
>WENV170535060
CEWP01020798
281676
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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