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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170538185
CEWR01059588
282684
Gammaproteobacteria
TTC
Glu
>WENV170538359
CEWR01073242
123265
Gammaproteobacteria
GAG
Leu
>WENV170539220
CEWR01156737
123265
Gammaproteobacteria
GAG
Leu
>WENV170538133
CEWR01056320
281440
Gammaproteobacteria
TGT
Thr
>WENV170539448
CEWR01214133
297858
Gammaproteobacteria
TGC
Ala
>WENV170537414
CEWR01004580
178164
Gammaproteobacteria
GAT
Ile
>WENV170538072
CEWR01051015
178164
Gammaproteobacteria
GAT
Ile
>WENV170539615
CEWR01269108
281439
Gammaproteobacteria
GAA
Phe
>WENV170538056
CEWR01049568
314350
Gammaproteobacteria
CCA
Trp
>WENV170539380
CEWR01192058
302377
Gammaproteobacteria
GTT
Asn
>WENV170537872
CEWR01035567
284022
Gammaproteobacteria
TGT
Thr
>WENV170537585
CEWR01016226
118078
Gammaproteobacteria
GTA
Tyr
>WENV170538468
CEWR01083442
220813
Gammaproteobacteria
CCG
Arg
>WENV170539383
CEWR01193352
281441
Gammaproteobacteria
CCT
Arg
>WENV170537642
CEWR01019587
285584
Gammaproteobacteria
TTT
Lys
>WENV170537812
CEWR01030006
285584
Gammaproteobacteria
TTT
Lys
>WENV170537853
CEWR01034366
281438
Gammaproteobacteria
GGC
Ala
>WENV170539405
CEWR01200391
399353
Gammaproteobacteria
GGT
Thr
>WENV170538498
CEWR01086991
313852
Gammaproteobacteria
TTC
Glu
>WENV170537358
CEWR01001180
292006
Gammaproteobacteria
TGC
Ala
>WENV170538134
CEWR01056320
140806
Gammaproteobacteria
GTA
Tyr
>WENV170538606
CEWR01098112
281436
Gammaproteobacteria
TGC
Ala
>WENV170538240
CEWR01064876
176791
Gammaproteobacteria
TGG
Pro
>WENV170537346
CEWR01000824
118920
Gammaproteobacteria
TAG
Leu
>WENV170537614
CEWR01018307
307269
Gammaproteobacteria
TTC
Glu
>WENV170537829
CEWR01031639
208229
Gammaproteobacteria
TGG
Pro
>WENV170538685
CEWR01106122
181365
Gammaproteobacteria
CAT
Met
>WENV170539570
CEWR01254897
334421
Gammaproteobacteria
TGT
Thr
>WENV170537659
CEWR01020068
488965
Gammaproteobacteria
GCA
Cys
>WENV170539527
CEWR01241973
282683
Gammaproteobacteria
GGC
Ala
>WENV170537888
CEWR01036576
178004
Gammaproteobacteria
CCA
Trp
>WENV170537978
CEWR01042716
176301
Gammaproteobacteria
GAT
Ile
>WENV170537357
CEWR01001180
176301
Gammaproteobacteria
GAT
Ile
>WENV170538403
CEWR01077616
141058
Gammaproteobacteria
GTA
Tyr
>WENV170538137
CEWR01056483
178003
Gammaproteobacteria
ACG
Arg
>WENV170538138
CEWR01056483
178003
Gammaproteobacteria
ACG
Arg
>WENV170537739
CEWR01026076
201377
Gammaproteobacteria
TGG
Pro
>WENV170537778
CEWR01027860
181277
Gammaproteobacteria
ACG
Arg
>WENV170539313
CEWR01164993
120800
Gammaproteobacteria
CAA
Leu
>WENV170537486
CEWR01009560
286980
Gammaproteobacteria
TTT
Lys
>WENV170538478
CEWR01085004
179710
Gammaproteobacteria
GAC
Val
>WENV170538135
CEWR01056320
480549
Gammaproteobacteria
TCC
Gly
>WENV170537432
CEWR01006552
282902
Gammaproteobacteria
TGT
Thr
>WENV170539360
CEWR01185622
74110
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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