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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541476
CXPO01000320
176499
Actinomycetota
CAT
Met
>WENV170541468
CXPO01000173
147806
Actinomycetota
TAA
Leu
>WENV170541454
CXPO01000061
280498
Actinomycetota
GTT
Asn
>WENV170541471
CXPO01000262
280498
Actinomycetota
GTT
Asn
>WENV170541477
CXPO01000345
459899
Actinomycetota
TTC
Glu
>WENV170541450
CXPO01000043
140768
Actinomycetota
TAG
Leu
>WENV170541483
CXPO01000730
175837
Actinomycetota
ACG
Arg
>WENV170541472
CXPO01000278
175837
Actinomycetota
ACG
Arg
>WENV170541463
CXPO01000162
176723
Actinomycetota
TCT
Arg
>WENV170541474
CXPO01000296
280523
Actinomycetota
GGC
Ala
>WENV170541451
CXPO01000045
176555
Actinomycetota
CAT
Met
>WENV170541445
CXPO01000018
280450
Actinomycetota
TTT
Lys
>WENV170541457
CXPO01000077
56166
Actinomycetota
TGA
Ser
>WENV170541473
CXPO01000283
358727
Actinomycetota
CCG
Arg
>WENV170541456
CXPO01000070
175882
Actinomycetota
TGG
Pro
>WENV170541481
CXPO01000415
280489
Actinomycetota
CTC
Glu
>WENV170541446
CXPO01000035
280499
Actinomycetota
CCT
Arg
>WENV170541482
CXPO01000442
237585
Actinomycetota
TAC
Val
>WENV170541475
CXPO01000320
117903
Actinomycetota
GTA
Tyr
>WENV170541449
CXPO01000043
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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