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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545550
CXSD01000030
481233
Actinomycetota
CCC
Gly
>WENV170545562
CXSD01000053
147829
Actinomycetota
TAA
Leu
>WENV170545534
CXSD01000015
280498
Actinomycetota
GTT
Asn
>WENV170545535
CXSD01000015
295964
Actinomycetota
GTT
Asn
>WENV170545519
CXSD01000005
140768
Actinomycetota
TAG
Leu
>WENV170545541
CXSD01000019
176075
Actinomycetota
TCT
Arg
>WENV170545555
CXSD01000044
175848
Actinomycetota
TGG
Pro
>WENV170545547
CXSD01000020
176078
Actinomycetota
GGG
Pro
>WENV170545528
CXSD01000012
482604
Actinomycetota
TTG
Gln
>WENV170545522
CXSD01000006
59689
Actinomycetota
GGA
Ser
>WENV170545532
CXSD01000012
175837
Actinomycetota
ACG
Arg
>WENV170545531
CXSD01000012
175837
Actinomycetota
ACG
Arg
>WENV170545539
CXSD01000018
29393
Actinomycetota
GCT
Ser
>WENV170545545
CXSD01000020
280549
Actinomycetota
CAC
Val
>WENV170545516
CXSD01000004
280549
Actinomycetota
CAC
Val
>WENV170545551
CXSD01000033
20450
Actinomycetota
GAG
Leu
>WENV170545529
CXSD01000012
280702
Actinomycetota
GGC
Ala
>WENV170545530
CXSD01000012
280702
Actinomycetota
GGC
Ala
>WENV170545526
CXSD01000009
176077
Actinomycetota
CAT
Met
>WENV170545513
CXSD01000003
280524
Actinomycetota
TGC
Ala
>WENV170545564
CXSD01000067
398948
Actinomycetota
TTC
Glu
>WENV170545537
CXSD01000018
117777
Actinomycetota
>WENV170545538
CXSD01000018
175949
Actinomycetota
CAT
Met
>WENV170545544
CXSD01000020
418252
Actinomycetota
GAC
Val
>WENV170545515
CXSD01000004
418252
Actinomycetota
GAC
Val
>WENV170545536
CXSD01000017
191955
Actinomycetota
TGT
Thr
>WENV170545540
CXSD01000019
280544
Actinomycetota
GTG
His
>WENV170545527
CXSD01000009
280703
Actinomycetota
CCT
Arg
>WENV170545552
CXSD01000036
280450
Actinomycetota
TTT
Lys
>WENV170545518
CXSD01000005
323758
Actinomycetota
CGT
Thr
>WENV170545554
CXSD01000041
56451
Actinomycetota
CGA
Ser
>WENV170545549
CXSD01000030
99865
Actinomycetota
CAG
Leu
>WENV170545553
CXSD01000036
222475
Actinomycetota
CTT
Lys
>WENV170545556
CXSD01000044
175843
Actinomycetota
CAA
Leu
>WENV170545563
CXSD01000057
317680
Actinomycetota
CCG
Arg
>WENV170545521
CXSD01000006
430848
Actinomycetota
CTG
Gln
>WENV170545520
CXSD01000006
289788
Actinomycetota
CTC
Glu
>WENV170545512
CXSD01000003
179238
Actinomycetota
GAT
Ile
>WENV170545510
CXSD01000001
60767
Actinomycetota
TGA
Ser
>WENV170545523
CXSD01000008
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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