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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546567
CXSV01000031
481233
Actinomycetota
CCC
Gly
>WENV170546538
CXSV01000007
147829
Actinomycetota
TAA
Leu
>WENV170546550
CXSV01000011
349003
Actinomycetota
CCG
Arg
>WENV170546528
CXSV01000005
280498
Actinomycetota
GTT
Asn
>WENV170546527
CXSV01000005
295964
Actinomycetota
GTT
Asn
>WENV170546553
CXSV01000011
140768
Actinomycetota
TAG
Leu
>WENV170546570
CXSV01000039
176075
Actinomycetota
TCT
Arg
>WENV170546537
CXSV01000007
175848
Actinomycetota
TGG
Pro
>WENV170546534
CXSV01000005
176078
Actinomycetota
GGG
Pro
>WENV170546536
CXSV01000007
482604
Actinomycetota
TTG
Gln
>WENV170546555
CXSV01000011
59689
Actinomycetota
GGA
Ser
>WENV170546572
CXSV01000086
175837
Actinomycetota
ACG
Arg
>WENV170546571
CXSV01000086
175837
Actinomycetota
ACG
Arg
>WENV170546542
CXSV01000007
175837
Actinomycetota
ACG
Arg
>WENV170546561
CXSV01000015
29393
Actinomycetota
GCT
Ser
>WENV170546565
CXSV01000018
280549
Actinomycetota
CAC
Val
>WENV170546532
CXSV01000005
280549
Actinomycetota
CAC
Val
>WENV170546546
CXSV01000011
349164
Actinomycetota
CTC
Glu
>WENV170546562
CXSV01000017
20450
Actinomycetota
GAG
Leu
>WENV170546541
CXSV01000007
280702
Actinomycetota
GGC
Ala
>WENV170546540
CXSV01000007
280702
Actinomycetota
GGC
Ala
>WENV170546564
CXSV01000018
434162
Actinomycetota
GAC
Val
>WENV170546531
CXSV01000005
434162
Actinomycetota
GAC
Val
>WENV170546524
CXSV01000001
176077
Actinomycetota
CAT
Met
>WENV170546558
CXSV01000013
280524
Actinomycetota
TGC
Ala
>WENV170546526
CXSV01000001
398948
Actinomycetota
TTC
Glu
>WENV170546559
CXSV01000015
117777
Actinomycetota
>WENV170546560
CXSV01000015
175949
Actinomycetota
CAT
Met
>WENV170546569
CXSV01000035
227544
Actinomycetota
TAC
Val
>WENV170546556
CXSV01000013
191955
Actinomycetota
TGT
Thr
>WENV170546535
CXSV01000006
280544
Actinomycetota
GTG
His
>WENV170546525
CXSV01000001
280703
Actinomycetota
CCT
Arg
>WENV170546548
CXSV01000011
280450
Actinomycetota
TTT
Lys
>WENV170546552
CXSV01000011
323758
Actinomycetota
CGT
Thr
>WENV170546543
CXSV01000010
56451
Actinomycetota
CGA
Ser
>WENV170546568
CXSV01000031
99865
Actinomycetota
CAG
Leu
>WENV170546549
CXSV01000011
222475
Actinomycetota
CTT
Lys
>WENV170546539
CXSV01000007
175843
Actinomycetota
CAA
Leu
>WENV170546547
CXSV01000011
430848
Actinomycetota
CTG
Gln
>WENV170546557
CXSV01000013
179238
Actinomycetota
GAT
Ile
>WENV170546544
CXSV01000010
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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