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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546769
CXSZ01000018
481233
Actinomycetota
CCC
Gly
>WENV170546771
CXSZ01000021
147829
Actinomycetota
TAA
Leu
>WENV170546756
CXSZ01000012
349003
Actinomycetota
CCG
Arg
>WENV170546741
CXSZ01000003
280498
Actinomycetota
GTT
Asn
>WENV170546742
CXSZ01000003
280498
Actinomycetota
GTT
Asn
>WENV170546759
CXSZ01000012
140768
Actinomycetota
TAG
Leu
>WENV170546772
CXSZ01000028
176075
Actinomycetota
TCT
Arg
>WENV170546731
CXSZ01000001
175848
Actinomycetota
TGG
Pro
>WENV170546740
CXSZ01000003
176078
Actinomycetota
GGG
Pro
>WENV170546730
CXSZ01000001
482604
Actinomycetota
TTG
Gln
>WENV170546761
CXSZ01000013
59689
Actinomycetota
GGA
Ser
>WENV170546729
CXSZ01000001
175837
Actinomycetota
ACG
Arg
>WENV170546728
CXSZ01000001
175837
Actinomycetota
ACG
Arg
>WENV170546748
CXSZ01000006
29393
Actinomycetota
GCT
Ser
>WENV170546745
CXSZ01000004
280549
Actinomycetota
CAC
Val
>WENV170546738
CXSZ01000003
280549
Actinomycetota
CAC
Val
>WENV170546762
CXSZ01000013
349164
Actinomycetota
CTC
Glu
>WENV170546750
CXSZ01000009
20450
Actinomycetota
GAG
Leu
>WENV170546726
CXSZ01000001
280702
Actinomycetota
GGC
Ala
>WENV170546727
CXSZ01000001
280702
Actinomycetota
GGC
Ala
>WENV170546744
CXSZ01000004
434162
Actinomycetota
GAC
Val
>WENV170546737
CXSZ01000003
434162
Actinomycetota
GAC
Val
>WENV170546754
CXSZ01000011
176077
Actinomycetota
CAT
Met
>WENV170546774
CXSZ01000029
280524
Actinomycetota
TGC
Ala
>WENV170546751
CXSZ01000011
398948
Actinomycetota
TTC
Glu
>WENV170546746
CXSZ01000006
117777
Actinomycetota
>WENV170546747
CXSZ01000006
175949
Actinomycetota
CAT
Met
>WENV170546767
CXSZ01000014
227544
Actinomycetota
TAC
Val
>WENV170546770
CXSZ01000019
191955
Actinomycetota
TGT
Thr
>WENV170546766
CXSZ01000014
280544
Actinomycetota
GTG
His
>WENV170546755
CXSZ01000011
280703
Actinomycetota
CCT
Arg
>WENV170546764
CXSZ01000013
280450
Actinomycetota
TTT
Lys
>WENV170546758
CXSZ01000012
323758
Actinomycetota
CGT
Thr
>WENV170546732
CXSZ01000002
56451
Actinomycetota
CGA
Ser
>WENV170546768
CXSZ01000018
99865
Actinomycetota
CAG
Leu
>WENV170546765
CXSZ01000013
222475
Actinomycetota
CTT
Lys
>WENV170546725
CXSZ01000001
175843
Actinomycetota
CAA
Leu
>WENV170546763
CXSZ01000013
430848
Actinomycetota
CTG
Gln
>WENV170546773
CXSZ01000029
179238
Actinomycetota
GAT
Ile
>WENV170546733
CXSZ01000002
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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