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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170555320
CXWL01000137
398980
Alphaproteobacteria
GAC
Val
>WENV170555423
CXWL01000579
403836
Alphaproteobacteria
>WENV170555429
CXWL01000581
398980
Alphaproteobacteria
GAC
Val
>WENV170555541
CXWL01000961
403836
Alphaproteobacteria
>WENV170555594
CXWL01001281
282749
Alphaproteobacteria
CGC
Ala
>WENV170555595
CXWL01001282
282749
Alphaproteobacteria
CGC
Ala
>WENV170555601
CXWL01001321
400517
Alphaproteobacteria
GGT
Thr
>WENV170555657
CXWL01001642
480900
Alphaproteobacteria
GCA
Cys
>WENV170555744
CXWL01002027
480900
Alphaproteobacteria
GCA
Cys
>WENV170555781
CXWL01002153
398986
Alphaproteobacteria
TAC
Val
>WENV170555816
CXWL01002410
216373
Alphaproteobacteria
TGG
Pro
>WENV170555873
CXWL01002782
195199
Alphaproteobacteria
GTC
Asp
>WENV170556018
CXWL01003908
404744
Alphaproteobacteria
GCC
Gly
>WENV170556086
CXWL01004693
281409
Alphaproteobacteria
TTT
Lys
>WENV170556125
CXWL01005015
179891
Alphaproteobacteria
GTG
His
>WENV170556137
CXWL01005137
403836
Alphaproteobacteria
>WENV170556187
CXWL01005521
398986
Alphaproteobacteria
TAC
Val
>WENV170556498
CXWL01009555
118150
Alphaproteobacteria
TAG
Leu
>WENV170556647
CXWL01011509
216373
Alphaproteobacteria
TGG
Pro
>WENV170556777
CXWL01013546
216373
Alphaproteobacteria
TGG
Pro
>WENV170556910
CXWL01016012
400223
Alphaproteobacteria
GGT
Thr
>WENV170557169
CXWL01020513
127573
Alphaproteobacteria
GTA
Tyr
>WENV170557299
CXWL01023371
398986
Alphaproteobacteria
TAC
Val
>WENV170557396
CXWL01025866
398996
Alphaproteobacteria
GCC
Gly
>WENV170557407
CXWL01026081
281409
Alphaproteobacteria
TTT
Lys
>WENV170557429
CXWL01026871
282748
Alphaproteobacteria
CGT
Thr
>WENV170557481
CXWL01028068
398980
Alphaproteobacteria
GAC
Val
>WENV170557512
CXWL01028723
400250
Alphaproteobacteria
GAC
Val
>WENV170557703
CXWL01034601
296763
Alphaproteobacteria
CCA
Trp
>WENV170557985
CXWL01045228
283559
Alphaproteobacteria
CGC
Ala
>WENV170558252
CXWL01059596
499180
Alphaproteobacteria
TCC
Gly
>WENV170558715
CXWL01086218
348750
Alphaproteobacteria
CAT
Met
>WENV170558926
CXWL01100421
404744
Alphaproteobacteria
GCC
Gly
>WENV170559024
CXWL01106665
398999
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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