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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170562722
CZCB01004876
400785
Euryarchaeota
GCA
Cys
>WENV170563101
CZCB01010011
400785
Euryarchaeota
GCA
Cys
>WENV170561832
CZCB01000182
400789
Euryarchaeota
GCC
Gly
>WENV170562660
CZCB01004283
400789
Euryarchaeota
GCC
Gly
>WENV170563923
CZCB01036942
102923
Euryarchaeota
GGA
Ser
>WENV170562332
CZCB01002232
156821
Euryarchaeota
CAT
Met
>WENV170562437
CZCB01002784
156821
Euryarchaeota
CAT
Met
>WENV170564096
CZCB01049782
179317
Euryarchaeota
CTT
Lys
>WENV170562069
CZCB01000795
56525
Euryarchaeota
>WENV170563957
CZCB01039153
156309
Euryarchaeota
TTC
Glu
>WENV170563200
CZCB01011825
284163
Euryarchaeota
GTT
Asn
>WENV170561985
CZCB01000509
284163
Euryarchaeota
GTT
Asn
>WENV170562179
CZCB01001303
56528
Euryarchaeota
GCT
Ser
>WENV170562333
CZCB01002232
179321
Euryarchaeota
TTT
Lys
>WENV170562375
CZCB01002339
179321
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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