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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170566165
FKKE01008280
195199
Alphaproteobacteria
GTC
Asp
>WENV170566258
FKKE01012384
195199
Alphaproteobacteria
GTC
Asp
>WENV170566638
FKKE01078858
282966
Alphaproteobacteria
TTT
Lys
>WENV170566144
FKKE01007718
180025
Alphaproteobacteria
TCT
Arg
>WENV170566035
FKKE01004749
73440
Alphaproteobacteria
CAG
Leu
>WENV170566161
FKKE01008068
399047
Alphaproteobacteria
GGT
Thr
>WENV170566372
FKKE01020645
178315
Alphaproteobacteria
CAT
Met
>WENV170566348
FKKE01018520
282872
Alphaproteobacteria
CCA
Trp
>WENV170566095
FKKE01006203
398980
Alphaproteobacteria
GAC
Val
>WENV170566253
FKKE01011988
319539
Alphaproteobacteria
GGC
Ala
>WENV170566569
FKKE01049778
282660
Alphaproteobacteria
CGC
Ala
>WENV170566614
FKKE01066370
180026
Alphaproteobacteria
CCT
Arg
>WENV170565886
FKKE01001827
413432
Alphaproteobacteria
GGT
Thr
>WENV170566000
FKKE01003776
180027
Alphaproteobacteria
CAT
Met
>WENV170565994
FKKE01003619
480958
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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