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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170566801
FLLY01004231
314350
Gammaproteobacteria
CCA
Trp
>WENV170567280
FLLY01111178
185999
Gammaproteobacteria
CCG
Arg
>WENV170567124
FLLY01055436
311084
Gammaproteobacteria
GCC
Gly
>WENV170567227
FLLY01090970
311084
Gammaproteobacteria
GCC
Gly
>WENV170567097
FLLY01046211
483085
Gammaproteobacteria
GCA
Cys
>WENV170567200
FLLY01080294
480629
Gammaproteobacteria
GCA
Cys
>WENV170566751
FLLY01001539
181365
Gammaproteobacteria
CAT
Met
>WENV170566700
FLLY01000010
176301
Gammaproteobacteria
GAT
Ile
>WENV170566878
FLLY01009969
281791
Gammaproteobacteria
GTG
His
>WENV170566880
FLLY01010098
286980
Gammaproteobacteria
TTT
Lys
>WENV170566760
FLLY01001744
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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