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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180013866
FPIC01005494
400188
Alphaproteobacteria
CCC
Gly
>WENV180014169
FPIC01075205
482973
Alphaproteobacteria
TCC
Gly
>WENV180014316
FPIC01163082
400848
Alphaproteobacteria
GAC
Val
>WENV180014104
FPIC01056229
29841
Alphaproteobacteria
GGA
Ser
>WENV180014127
FPIC01060558
140876
Alphaproteobacteria
>WENV180013981
FPIC01021395
282924
Alphaproteobacteria
CGC
Ala
>WENV180014038
FPIC01034385
202191
Alphaproteobacteria
CCG
Arg
>WENV180014176
FPIC01076785
78800
Alphaproteobacteria
CAG
Leu
>WENV180014162
FPIC01072008
340918
Alphaproteobacteria
CGT
Thr
>WENV180014058
FPIC01038840
32398
Alphaproteobacteria
CGA
Ser
>WENV180014098
FPIC01055374
400190
Alphaproteobacteria
>WENV180014111
FPIC01056710
400186
Alphaproteobacteria
GTT
Asn
>WENV180014178
FPIC01078186
324019
Alphaproteobacteria
TGC
Ala
>WENV180014129
FPIC01061675
482561
Alphaproteobacteria
TCC
Gly
>WENV180013920
FPIC01010466
398998
Alphaproteobacteria
TTG
Gln
>WENV180014041
FPIC01035339
178728
Alphaproteobacteria
CGG
Pro
>WENV180014087
FPIC01049648
453762
Alphaproteobacteria
CAC
Val
>WENV180014233
FPIC01106516
29645
Alphaproteobacteria
CGA
Ser
>WENV180014328
FPIC01170961
73747
Alphaproteobacteria
CAG
Leu
>WENV180014167
FPIC01074972
398994
Alphaproteobacteria
GTT
Asn
>WENV180013995
FPIC01023719
480392
Alphaproteobacteria
GCA
Cys
>WENV180013874
FPIC01006191
178196
Alphaproteobacteria
GTG
His
>WENV180014121
FPIC01059334
399210
Alphaproteobacteria
CAT
Met
>WENV180013888
FPIC01007296
480946
Alphaproteobacteria
TTG
Gln
>WENV180014259
FPIC01118929
176633
Alphaproteobacteria
GAT
Ile
>WENV180014324
FPIC01169101
13311
Alphaproteobacteria
GCT
Ser
>WENV180014016
FPIC01030514
118136
Alphaproteobacteria
CAA
Leu
>WENV180014256
FPIC01117262
284374
Alphaproteobacteria
TTT
Lys
>WENV180014298
FPIC01152340
209657
Alphaproteobacteria
TAC
Val
>WENV180014318
FPIC01163926
398996
Alphaproteobacteria
GCC
Gly
>WENV180014144
FPIC01067793
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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