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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577979
FSSH01004483
77010
Alphaproteobacteria
GAG
Leu
>WENV170577877
FSSH01002300
106524
Alphaproteobacteria
GTA
Tyr
>WENV170577644
FSSH01000384
208947
Alphaproteobacteria
CAT
Met
>WENV170577843
FSSH01001916
208947
Alphaproteobacteria
CAT
Met
>WENV170577788
FSSH01001195
183848
Alphaproteobacteria
CGG
Pro
>WENV170577570
FSSH01000208
482902
Alphaproteobacteria
TCC
Gly
>WENV170577671
FSSH01000509
482902
Alphaproteobacteria
TCC
Gly
>WENV170577915
FSSH01002675
482902
Alphaproteobacteria
TCC
Gly
>WENV170577932
FSSH01003373
482902
Alphaproteobacteria
TCC
Gly
>WENV170577549
FSSH01000169
293747
Alphaproteobacteria
CTT
Lys
>WENV170577532
FSSH01000122
406803
Alphaproteobacteria
TTG
Gln
>WENV170578133
FSSH01030322
282966
Alphaproteobacteria
TTT
Lys
>WENV170577770
FSSH01000989
118147
Alphaproteobacteria
CAA
Leu
>WENV170577751
FSSH01000778
192328
Alphaproteobacteria
ACG
Arg
>WENV170577754
FSSH01000838
282748
Alphaproteobacteria
CGT
Thr
>WENV170577814
FSSH01001557
202191
Alphaproteobacteria
CCG
Arg
>WENV170578091
FSSH01015013
431636
Alphaproteobacteria
CTC
Glu
>WENV170578010
FSSH01005841
427571
Alphaproteobacteria
GCC
Gly
>WENV170577764
FSSH01000917
282749
Alphaproteobacteria
CGC
Ala
>WENV170578085
FSSH01013318
368481
Alphaproteobacteria
TGC
Ala
>WENV170577490
FSSH01000065
183628
Alphaproteobacteria
CCG
Arg
>WENV170577476
FSSH01000044
404744
Alphaproteobacteria
GCC
Gly
>WENV170577602
FSSH01000257
29655
Alphaproteobacteria
TGA
Ser
>WENV170577917
FSSH01002949
400285
Alphaproteobacteria
CAC
Val
>WENV170577725
FSSH01000631
178240
Alphaproteobacteria
GTC
Asp
>WENV170577763
FSSH01000913
400029
Alphaproteobacteria
GGT
Thr
>WENV170577552
FSSH01000176
228484
Alphaproteobacteria
CCG
Arg
>WENV170577978
FSSH01004481
290521
Alphaproteobacteria
GAA
Phe
>WENV170577750
FSSH01000778
304816
Alphaproteobacteria
CGT
Thr
>WENV170577720
FSSH01000595
179993
Alphaproteobacteria
GTC
Asp
>WENV170577982
FSSH01004552
289671
Alphaproteobacteria
TAC
Val
>WENV170577730
FSSH01000643
184816
Alphaproteobacteria
GTG
His
>WENV170577558
FSSH01000179
310632
Alphaproteobacteria
TGT
Thr
>WENV170577723
FSSH01000613
406705
Alphaproteobacteria
GAC
Val
>WENV170577827
FSSH01001731
366782
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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