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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180020005
FTCV01000290
121250
Alphaproteobacteria
TAG
Leu
>WENV180020024
FTCV01000732
283559
Alphaproteobacteria
CGC
Ala
>WENV180020026
FTCV01000764
178315
Alphaproteobacteria
CAT
Met
>WENV180020028
FTCV01000772
414252
Alphaproteobacteria
CAC
Val
>WENV180020036
FTCV01000863
127573
Alphaproteobacteria
GTA
Tyr
>WENV180020085
FTCV01001616
289945
Alphaproteobacteria
TTC
Glu
>WENV180020096
FTCV01001805
287439
Alphaproteobacteria
CCA
Trp
>WENV180020128
FTCV01002231
282977
Alphaproteobacteria
CAT
Met
>WENV180020130
FTCV01002257
404592
Alphaproteobacteria
GGT
Thr
>WENV180020136
FTCV01002314
29655
Alphaproteobacteria
TGA
Ser
>WENV180020137
FTCV01002328
480900
Alphaproteobacteria
GCA
Cys
>WENV180020139
FTCV01002366
403836
Alphaproteobacteria
>WENV180020154
FTCV01002552
415537
Alphaproteobacteria
>WENV180020158
FTCV01002649
406803
Alphaproteobacteria
TTG
Gln
>WENV180020163
FTCV01002738
399340
Alphaproteobacteria
GTT
Asn
>WENV180020166
FTCV01002794
208947
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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