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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180020662
FTCZ01008030
77010
Alphaproteobacteria
GAG
Leu
>WENV180020295
FTCZ01001293
430786
Alphaproteobacteria
TGT
Thr
>WENV180020488
FTCZ01004739
430786
Alphaproteobacteria
TGT
Thr
>WENV180020279
FTCZ01000919
283560
Alphaproteobacteria
CTT
Lys
>WENV180020447
FTCZ01004031
481048
Alphaproteobacteria
GCA
Cys
>WENV180020483
FTCZ01004614
293747
Alphaproteobacteria
CTT
Lys
>WENV180020528
FTCZ01005484
334086
Alphaproteobacteria
GGC
Ala
>WENV180020259
FTCZ01000822
281452
Alphaproteobacteria
CGT
Thr
>WENV180020327
FTCZ01001600
178062
Alphaproteobacteria
CAT
Met
>WENV180020328
FTCZ01001600
178062
Alphaproteobacteria
CAT
Met
>WENV180020655
FTCZ01007946
283559
Alphaproteobacteria
CGC
Ala
>WENV180020380
FTCZ01002410
289945
Alphaproteobacteria
TTC
Glu
>WENV180020612
FTCZ01007279
289945
Alphaproteobacteria
TTC
Glu
>WENV180020571
FTCZ01006300
337513
Alphaproteobacteria
TGT
Thr
>WENV180020362
FTCZ01002045
400258
Alphaproteobacteria
>WENV180020435
FTCZ01003785
178314
Alphaproteobacteria
GTG
His
>WENV180020402
FTCZ01002981
202065
Alphaproteobacteria
GGG
Pro
>WENV180020583
FTCZ01006617
13411
Alphaproteobacteria
GCT
Ser
>WENV180020370
FTCZ01002187
119367
Alphaproteobacteria
TAG
Leu
>WENV180020610
FTCZ01007242
303339
Alphaproteobacteria
GGC
Ala
>WENV180020547
FTCZ01005934
308662
Alphaproteobacteria
GAA
Phe
>WENV180020290
FTCZ01001220
400223
Alphaproteobacteria
GGT
Thr
>WENV180020654
FTCZ01007923
336350
Alphaproteobacteria
GAA
Phe
>WENV180020661
FTCZ01008021
305403
Alphaproteobacteria
>WENV180020587
FTCZ01006684
234690
Alphaproteobacteria
CGG
Pro
>WENV180020408
FTCZ01003066
499180
Alphaproteobacteria
TCC
Gly
>WENV180020407
FTCZ01003066
118162
Alphaproteobacteria
GTA
Tyr
>WENV180020508
FTCZ01005098
282977
Alphaproteobacteria
CAT
Met
>WENV180020469
FTCZ01004413
196842
Alphaproteobacteria
CGG
Pro
>WENV180020533
FTCZ01005642
182471
Alphaproteobacteria
GTG
His
>WENV180020625
FTCZ01007602
182471
Alphaproteobacteria
GTG
His
>WENV180020663
FTCZ01008043
400103
Alphaproteobacteria
TGT
Thr
>WENV180020490
FTCZ01004757
400249
Alphaproteobacteria
GCC
Gly
>WENV180020499
FTCZ01004947
178197
Alphaproteobacteria
CAT
Met
>WENV180020523
FTCZ01005340
30671
Alphaproteobacteria
GGA
Ser
>WENV180020220
FTCZ01000071
178337
Alphaproteobacteria
GTG
His
>WENV180020379
FTCZ01002313
317915
Alphaproteobacteria
GAA
Phe
>WENV180020673
FTCZ01008182
317915
Alphaproteobacteria
GAA
Phe
>WENV180020656
FTCZ01007946
404744
Alphaproteobacteria
GCC
Gly
>WENV180020217
FTCZ01000048
24546
Alphaproteobacteria
GGA
Ser
>WENV180020668
FTCZ01008120
9363
Alphaproteobacteria
GCT
Ser
>WENV180020371
FTCZ01002187
429824
Alphaproteobacteria
TAC
Val
>WENV180020383
FTCZ01002510
184177
Alphaproteobacteria
TCT
Arg
>WENV180020293
FTCZ01001250
490723
Alphaproteobacteria
CTG
Gln
>WENV180020626
FTCZ01007635
182475
Alphaproteobacteria
GTC
Asp
>WENV180020660
FTCZ01007966
200110
Alphaproteobacteria
ACG
Arg
>WENV180020596
FTCZ01006922
200110
Alphaproteobacteria
ACG
Arg
>WENV180020294
FTCZ01001254
73747
Alphaproteobacteria
CAG
Leu
>WENV180020413
FTCZ01003203
178252
Alphaproteobacteria
TGG
Pro
>WENV180020667
FTCZ01008085
29667
Alphaproteobacteria
TGA
Ser
>WENV180020329
FTCZ01001600
399210
Alphaproteobacteria
CAT
Met
>WENV180020307
FTCZ01001305
400274
Alphaproteobacteria
TTT
Lys
>WENV180020534
FTCZ01005643
480946
Alphaproteobacteria
TTG
Gln
>WENV180020445
FTCZ01003996
399408
Alphaproteobacteria
TGT
Thr
>WENV180020452
FTCZ01004141
399408
Alphaproteobacteria
TGT
Thr
>WENV180020604
FTCZ01007137
399408
Alphaproteobacteria
TGT
Thr
>WENV180020412
FTCZ01003164
304816
Alphaproteobacteria
CGT
Thr
>WENV180020401
FTCZ01002947
480900
Alphaproteobacteria
GCA
Cys
>WENV180020513
FTCZ01005168
480900
Alphaproteobacteria
GCA
Cys
>WENV180020579
FTCZ01006532
480900
Alphaproteobacteria
GCA
Cys
>WENV180020330
FTCZ01001615
118550
Alphaproteobacteria
GAG
Leu
>WENV180020465
FTCZ01004321
118550
Alphaproteobacteria
GAG
Leu
>WENV180020368
FTCZ01002131
29743
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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