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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180023894
FTIF01003516
290590
Betaproteobacteria
TAC
Val
>WENV180023929
FTIF01004390
290590
Betaproteobacteria
TAC
Val
>WENV180023950
FTIF01004961
290590
Betaproteobacteria
TAC
Val
>WENV180024177
FTIF01140805
290590
Betaproteobacteria
TAC
Val
>WENV180023953
FTIF01004989
333120
Betaproteobacteria
CCA
Trp
>WENV180023858
FTIF01002064
185257
Betaproteobacteria
CAT
Met
>WENV180023982
FTIF01005435
185257
Betaproteobacteria
CAT
Met
>WENV180024090
FTIF01033733
185257
Betaproteobacteria
CAT
Met
>WENV180024137
FTIF01066906
185257
Betaproteobacteria
CAT
Met
>WENV180024133
FTIF01063497
100103
Betaproteobacteria
GTA
Tyr
>WENV180024156
FTIF01097216
100103
Betaproteobacteria
GTA
Tyr
>WENV180024172
FTIF01126422
100103
Betaproteobacteria
GTA
Tyr
>WENV180023905
FTIF01003686
56360
Betaproteobacteria
CGA
Ser
>WENV180024045
FTIF01014565
56360
Betaproteobacteria
CGA
Ser
>WENV180024085
FTIF01032438
56360
Betaproteobacteria
CGA
Ser
>WENV180024091
FTIF01034051
56360
Betaproteobacteria
CGA
Ser
>WENV180024192
FTIF01177133
56360
Betaproteobacteria
CGA
Ser
>WENV180024196
FTIF01197033
56360
Betaproteobacteria
CGA
Ser
>WENV180024190
FTIF01171278
198132
Betaproteobacteria
CAT
Met
>WENV180024060
FTIF01018963
198132
Betaproteobacteria
CAT
Met
>WENV180024046
FTIF01014702
198132
Betaproteobacteria
CAT
Met
>WENV180023986
FTIF01005701
198132
Betaproteobacteria
CAT
Met
>WENV180023892
FTIF01003478
198132
Betaproteobacteria
CAT
Met
>WENV180024135
FTIF01063497
452715
Betaproteobacteria
GGT
Thr
>WENV180024167
FTIF01111205
299575
Betaproteobacteria
TGC
Ala
>WENV180023928
FTIF01004381
299575
Betaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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